| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2051 |
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| Symbol | |
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| ID | 4173925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2495696 |
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| End bp | 2496922 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055059 |
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| Product | allantoate amidohydrolase |
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| Protein accession | YP_661623 |
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| Protein GI | 109898368 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAT TAGCCCCCTA CGCTATTCAA ACATACGAGC GCTGTGATGT GCTCGCCCAT
ATTAGTCAAG ACCCAGATTG TATTGACCGG CAGTACCTAA CGCCTGAGCA TTTACAAGCT
AACCGCCAGG TGGCTTTATG GATGGAACAA GCAGGCATGG AAACCTGGCA AGATGCAGCC
GCCAATCAAT GGGGGCGTTA TCCAAGTAGT CATCCTGATG CCAAAACGTT AGTCATAGGT
AGCCACTTAG ATACCGTGCC CAATAGCGGA AAATACGATG GGATCTTAGG TGTATTGGCG
CCATTGAGCT TAATTCATTA TCTACATGAT CATCATATCA AGTTACCTTT TCATCTAGAG
TTAGTGGGGT TTGGTGACGA AGAAGGCACA CGATTTGGAG CAACCTTATT AGGTAGCTGT
GCGGTCGCCG GTACGTGGCA AGAAAAATGG AACGATTTGA CTGATGAAAA TGGTGTGTCG
TTGACCCAAG CGTTTCTCGA TGCTGGGCTT GATATTGCCG AAGTACACAA CGCATCCCGC
AGCCAGTCTA ATGTCAGCGA CTTTTTCGAG TTTCATATCG AACAAGGCCC AGTACTTGAA
GACAACGATT TAGCCGTTGG TGTGGTCAAT GGCATTGCTG GAGCAAAACG TTTTGCTATC
ACCCTAAAAG GCTTAGCAGG TCACGCGGGG ACAGTCCCCA TGCCCATGCG CCAAGATGCA
CTTGCTGCAG CGAGTGAAAT GATTTTAGCC ATTGAGCGTT TGGCCACAGA AAAAGGCATA
GTGGCGACTG TGGGTCATCT AAAATGTTTG TCAGGTGCGG TTAATGTTAT ATCAGGCGCG
ACCACTTTTA GCTTAGACAT ACGCAGTATT GATGACGCCC TAAGGGATGA GACCTTAAAA
CTCATCATTG ATGAATTAAA CCTTATCGCA CAGAAAAGAC GTGTAAAAAT GGATATCGCG
CCAACGCACC AAGCGCCAGC GGTAAAATGT GACGAGAATT TGCAGCAACA ATTGTTGGAT
GCGTGTAAAA CTAGTGAAGT TCTGCCTTTT ACGCTCGCAT CTGGTGCTGG GCATGACACC
ATGGCCATGG CTGATGTATG CCCCGTTGCT ATGCTGTTTA TGCGCTGCGA AAAAGGATTA
AGTCATCATC CTGGCGAAGC GATAGAGGTG CCAGATATAG AAATCGCACT GAAAGTCATG
TTTGCATTCT TACAAAATTA TGCATAA
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| Protein sequence | MTTLAPYAIQ TYERCDVLAH ISQDPDCIDR QYLTPEHLQA NRQVALWMEQ AGMETWQDAA
ANQWGRYPSS HPDAKTLVIG SHLDTVPNSG KYDGILGVLA PLSLIHYLHD HHIKLPFHLE
LVGFGDEEGT RFGATLLGSC AVAGTWQEKW NDLTDENGVS LTQAFLDAGL DIAEVHNASR
SQSNVSDFFE FHIEQGPVLE DNDLAVGVVN GIAGAKRFAI TLKGLAGHAG TVPMPMRQDA
LAAASEMILA IERLATEKGI VATVGHLKCL SGAVNVISGA TTFSLDIRSI DDALRDETLK
LIIDELNLIA QKRRVKMDIA PTHQAPAVKC DENLQQQLLD ACKTSEVLPF TLASGAGHDT
MAMADVCPVA MLFMRCEKGL SHHPGEAIEV PDIEIALKVM FAFLQNYA
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