| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2039 |
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| Symbol | |
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| ID | 4173913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2483805 |
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| End bp | 2484686 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055047 |
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| Product | hypothetical protein |
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| Protein accession | YP_661611 |
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| Protein GI | 109898356 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2961] Protein involved in catabolism of external DNA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTAGTT ATCGCCACGG CTACCATGCA GGTAATCACG CAGATGTGTT GAAACATATT
TGCCAGATGT TGATCATCGA CAAGTTAAAA CAAAAAGATA AAGGGTTCAC TTATATTGAT
ACCCACAGTG GCGCGGGCTT GTACGACTTG TCCTCTGAAC AATCTTTAAA GACCAATGAG
TTTCAGCAAG GTATTTCACG GTTAGCTGAT TATTCGGGGG CTGAACCAAC GGTTTTGGCA
TATCAAGCGC TTACCAGCAG TTATTTAAAG CATCAGCAAT ATCCTGGATC ACCTGAAATT
GCCCGTGTGT TAATGCGAGA TCAAGACCAG CTGCACCTGA TGGAGTGGAA TAATCAAGAG
GTGATTAATC TGAAGCGCCA AATAAAAGGC ACGCATATTT CAGTTCATCA CAGAGATGGC
TACGAAGGCT TGATTGCGTT GACGCCTCCA AAGCTAAAGC GCGGCCTCGT GCTGACAGAT
CCGTCATACG AAACATCAGA AGATTATCAA TTAGTGGTTG ACGCTATCAG TAAGGCCTAT
AAACGTTGGC CGACTGCTAT TTATGCTATT TGGTATCCTT TGCTATCGAA ACGCGATGAA
GACCAAAATG ATGGTTTTGA ACGGGCCACG ACTAAGCATA AGAAAAGTCA AAAAATGCTC
GACGATCTTA CTCAGCATGG CTTTAAGAAT GTACTGCAAG TCGAGCTGGC GGTTCAAAAC
CCTGATACAT TTGCCGGAAT GTATGGCTCA GGTATGGCGA TCATCAATGC GCCGTGGCAG
TTAGACGCGC AAATTCGTGA TTGCTTGGGC GAACTAACAC CTGTTATGGC TCAACACAAA
CACGCTTCAT TTGTGGTTAA CTGGCTGGTG GAAGAGGCCT AA
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| Protein sequence | MFSYRHGYHA GNHADVLKHI CQMLIIDKLK QKDKGFTYID THSGAGLYDL SSEQSLKTNE
FQQGISRLAD YSGAEPTVLA YQALTSSYLK HQQYPGSPEI ARVLMRDQDQ LHLMEWNNQE
VINLKRQIKG THISVHHRDG YEGLIALTPP KLKRGLVLTD PSYETSEDYQ LVVDAISKAY
KRWPTAIYAI WYPLLSKRDE DQNDGFERAT TKHKKSQKML DDLTQHGFKN VLQVELAVQN
PDTFAGMYGS GMAIINAPWQ LDAQIRDCLG ELTPVMAQHK HASFVVNWLV EEA
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