| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2027 |
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| Symbol | |
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| ID | 4173901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2468655 |
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| End bp | 2469539 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638055035 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_661599 |
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| Protein GI | 109898344 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAATC ATAACCACAG TCACAGTAAT AACAGCGCTT CAAAACGCAT TGGCTGGGCA
TTTTTCTTGA ATGTCGTATT CACTATCATT GAATTTATAG GCGGATGGCT GACAAACAGC
ACGGCCATAA TGGCTGACGC AGTACATGAT TTGGGCGATA GTTTATCTAT TGGCACTGCA
TGGGGTTTGA ACAAGCTAAG CGATAAAGAC GCGAATACCA CATTTTCATA TGGTTATAAA
CGATTCTCGC TGTTAGGCGC TTTGATCAAC GGAGTTGTTT TAACTATAGG CTCAATATGG
ATTTTATTCG AGGCCATACC TAGGCTTTCA GCACCTGAAA TGCCGCAAGT GGAAGGTATG
CTATTGCTTT CGATATTTGG TATCGCGGTA AATGGTTTTG CCGCGTATAA ACTTAGCGAA
GGGAACTCCT TAAACGAGCG TATCTTAAAC TGGCACTTAC TTGAAGATGT ATTGGGTTGG
GTGGCAGTAC TGATCGTATC GATTGTGCTG ATGTTCAAGC CATGGGCAAT TTTGGATCCC
ATTTTATCTA TTGGCTTTAC ATTATTCATT TTATTCAATG TCGTCAGAAA TCTAAAAGAA
ACCTTATTGT TATTTTTGCA AGGCACGCCA GATACGACGC AGATGGTAAA AGTGCGTAAA
GTGCTCATGT CAAACGCTGA TGTGGCGGAT ATACATCATT TTCATATCTG GTCTTTGGAC
GGTGAACATA GCGTCATGAC GGCACATGTG GTGTTGAAAC AAGATGTTTC GATTTCTCAA
TTGAGAACAC TCAAAGACGA ATTTCGTCAC GACCTTGGTG AGTTTGACTT TGTGCACACT
ACCATTGAAA TTGAATTTGC CAATGAAGAT TGCCGTGATA AATAA
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| Protein sequence | MHNHNHSHSN NSASKRIGWA FFLNVVFTII EFIGGWLTNS TAIMADAVHD LGDSLSIGTA
WGLNKLSDKD ANTTFSYGYK RFSLLGALIN GVVLTIGSIW ILFEAIPRLS APEMPQVEGM
LLLSIFGIAV NGFAAYKLSE GNSLNERILN WHLLEDVLGW VAVLIVSIVL MFKPWAILDP
ILSIGFTLFI LFNVVRNLKE TLLLFLQGTP DTTQMVKVRK VLMSNADVAD IHHFHIWSLD
GEHSVMTAHV VLKQDVSISQ LRTLKDEFRH DLGEFDFVHT TIEIEFANED CRDK
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