| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2007 |
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| Symbol | |
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| ID | 4173881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2448458 |
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| End bp | 2450155 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055015 |
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| Product | hypothetical protein |
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| Protein accession | YP_661579 |
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| Protein GI | 109898324 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0554485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA CAAGACTGGC AGTATTCACA CTTTCTGCAT TGACGATGTC CATGGCAAAC
GCTGCTCAAT ATACAGTGGT TGAGCTAGAA GCGAATGATA AAGGTGTGAA TGTCTTCCCA
ACGGATATAA ACGCCAGCGG GCAAATCGCT GTCAATGTTT CTACACCTTA TAATCCGCCG
ATTGATGAAA CGTTGATTGA TTTTGACTCT CAATTGCTGA TTGATAACCT AACCGATATC
GAAGCGGCTA AAGTGGGTAA CTATAACGAC GCAGATTACA TACTTTTATA TGCCTTGATT
ACCGATAACC GTGAAGGGTT GACGACGCAA CAAATTGCTA GTCGACATGC TTATCTAGAA
TCTGATGGTA GTGATATGTT TATTCCTGGC TTTGATGTCC TAGATACAGA TAGCAACGAA
TATACCTTCA GTAATGATAT AACGGTGCGT GGTTTAAATG ATGTAGGCAC AACAGTCGGC
AGTAGTTTTG ATGTTTTCTA CCCCCTTGAT TACACATTAG AAGATGGCAC CGAGTTAACT
TATGTTGTTA ATGATTTCTA TACCAGAGCA TATGCCACAG TAAACAACAC CACTGTTGAA
CTACCGCCAA TTGACGATAC CGCTGGGGGG GTGAGTGTTG CTTATGATGT AAATAACAAT
AACCAAGTCG CAGGTTATAG CACTTCGTTG TTAAATTCGA CCTCTTTGCA AACGTCTGTG
GACAACTGCA ACGATGATGA CATACGTGCT GATGAGCCGG TTGAAGTGTG CCTAAGGCGT
ATCAACCTAG CTACCTCAAC AAATGGTGAG AAAGCATTAG AGTTCAGCTT TCAGCGCCGC
GCTACTATTT GGCAGTTAGA TAATCAAGGT CAGATCATCA GCACCAAAGA GCTTGGTTTG
TTGTATACCC CAGAGGAAGA TGACACTAAT AGTTATGAAA GTAAGGCTTT GGCTATTAAC
GACAATGGAG TTGCAGTCGG TGAATCCCAG GATGAGTATC GGGACAGCGG TTTTATACGA
ACATTTGCCG CGGTTTTTGA AGGCGATACC GTTAAAGGTA TTACTGATGA TGAAGATTTT
ACCTCAAGCA CGGCCACAGA CATCAACAAT AATGGTCTAG TGGTTGGCTC CGGTGTCAAG
CAAGTGAATG GTATATCACG CAGTAAATTT TTTGTGCATG ATATCAACAC CGATGAAACC
ATTTTTCCAG AAGACTTCTT CTTAGGCTCC TCAAGCTTTG CTACCGCAAT TAATAACTCA
GGTATTGTTG TGGGTCGAGG TGAGGTGGAA ACGGGTGTAT CAGCACGTAG AAGCAACGCA
TTTCGTTATG ATACGAATAC ATCAGAGTTC GTTAACATGA ACGATTTAAT TCAATGTAAC
TCACCATACA CTTTGGTGAA TGCAACGGGC ATCAATGATA ATGGTGTGGT GACAGCATCA
GCTTTAACGC GTGTACCTTC CAAAAATATT TTGGGGGAGA CATTACTAGA CAGCAATGGT
GACGAAGTTA TAGTTGATAA AGTCATCAGT GTTCGCCTTG AGCCAATAAT GGGTGGGACC
GTTGAAGATT GTGATGTGAC TGAGCCTGGA GAAGACCCTA GTGACGGTAA TGATTCAGAC
CGTAAAGGTG CAGGTTTTGG TGTGCTATCA CTTTTCGGTT TAGTGGTTGT GGCAATCCGC
AGACGTTTTA AAGCGTAG
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| Protein sequence | MNKTRLAVFT LSALTMSMAN AAQYTVVELE ANDKGVNVFP TDINASGQIA VNVSTPYNPP
IDETLIDFDS QLLIDNLTDI EAAKVGNYND ADYILLYALI TDNREGLTTQ QIASRHAYLE
SDGSDMFIPG FDVLDTDSNE YTFSNDITVR GLNDVGTTVG SSFDVFYPLD YTLEDGTELT
YVVNDFYTRA YATVNNTTVE LPPIDDTAGG VSVAYDVNNN NQVAGYSTSL LNSTSLQTSV
DNCNDDDIRA DEPVEVCLRR INLATSTNGE KALEFSFQRR ATIWQLDNQG QIISTKELGL
LYTPEEDDTN SYESKALAIN DNGVAVGESQ DEYRDSGFIR TFAAVFEGDT VKGITDDEDF
TSSTATDINN NGLVVGSGVK QVNGISRSKF FVHDINTDET IFPEDFFLGS SSFATAINNS
GIVVGRGEVE TGVSARRSNA FRYDTNTSEF VNMNDLIQCN SPYTLVNATG INDNGVVTAS
ALTRVPSKNI LGETLLDSNG DEVIVDKVIS VRLEPIMGGT VEDCDVTEPG EDPSDGNDSD
RKGAGFGVLS LFGLVVVAIR RRFKA
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