| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2001 |
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| Symbol | |
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| ID | 4173875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2434888 |
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| End bp | 2437203 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638055009 |
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| Product | hypothetical protein |
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| Protein accession | YP_661573 |
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| Protein GI | 109898318 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA TTATAAAATT TTTAGAATCC TTGATTTTCA AAAACCGTAT CGCCGTTCTG
TTGCTCTTTT TGGTAGCGAC TATTTTTCTC GGATACCAAT CGTCACAACT CCGTCTAGAT
GCGGGCTTTA CCAAGAATAT CCCCCTTAAT CATGATTACA TGCAAAACTA CATGAAGCAT
GTCAATGATT TTGGTGGTGC GAATAGTATT TTGGTCTCTG TTTGTGACAA AGACGGTGAC
ATCTTTAATC AAAACTTTTT TGATACTTTG AAAGACGTAC ACGATCAGTT ATTTTTCATT
AATGGTGTTG ACCGCTCTTT GGTTAAATCA CTCTTTTCAT CCTCAACGCG ATTTACTGAG
ATTGTAGAGG GTGGTTTTGC AGGTGGTCCG GTTATCCCTG CTGATTTCAA TTCTTCTGAG
CAACGTGGCT TAGATAAAGT GTCATCCAAT ATTGAAAAAG CAGGTATTGT CGGCAGTTTG
GTGTCTGATG ATTATCAGTG TGCCATGGTC AACGCAAAAT TATTGGATTT GGATCCAGAA
ACGGGTGAGA AGCTTGACAC TCTGGCCTTA GCGGATGAGC TCGAAACTCA GCTTCGTGGT
CAGTTTGAAA CCGACGATAT CTCTATACAT ATTATTGGCT TTGCAAAGAT GATTGGTGAT
GTGGCCAATG GTGCTAAAGA CGTATTGGTG TTTTTTGCCA TCGCTATTGC GATTACCGCA
GTGCTCGTTT ATTTCTTCTG TAAATCGCTG ATGTTGACCG TATTACCACT GCTGTGTTCA
ATCATTGCGG TGATTTGGCA AATGGGGTTG CTCACGTTAC TGGGTTTTGG TCTTGACCCC
ATGTCGATAT TAGTGCCTTT CCTCGTTTTT GCGATTGGGA TTAGTCATGG TGTACAAATG
ATCAATTCTG TCGGTAAAGA GGTCACTAAA GGCAGTTCCT CGTTTGATGC CGCTAAGCTG
GCCTTTACCA CCTTGTTAAT ACCTGGTGGC GTGGCGCTAC TGTCCGACAC GATTGGCTTT
ATGACATTAT TGGTTATTGA TATTGGTATC ATTCGCGAGC TTGCTATCAC GGCAAGTATG
GGTGTGGCGG TAATCATTTT AACGAACCTA TTGTTGCTGC CTGTGCTGAT GTCTTTCGTT
AAATTTAGCG AAAAATATAA GCAAAAATTT GCAGGTAAGG AAAATCGCGC AGATAAGTTT
TGGGATGGGA TAGCAGCATG CTCTAGCCCG AAAGTGGCGA TTGTTATACT CGTTGTCACT
GCAGTCTTAT TTGGTTTCGG TTGGATGCAA GCCCAAAAAA TGAAAATTGG TGATTTGCAC
GCTGGTGCGC CTGCGCTTCA TGCATCGTCT CGTTACAATC AAGACACGTT TTTGATTACT
GACAAATATG AAATCAGCAC TGATTACATG TCGATTCTGG TCGAAGCGAC CAAAGATGCT
TGTACTTCAT ATGACGTGAT GAATTCAATT GACGAACTAC AATGGCGCAT GAGCAATATC
GAGGGTGTGC AATCTGCAGT TAGCTTAGCC TCGGTGGCTA AAATTATTAA TGCGGGCTAC
AACGAAGGAA ACGCGAAATG GCGCGTACTT CCGCGCAATC AACAGACTTT AGTTCAGGAT
ATCGCGCGGG TTGATACCTC ATCTGGTTTG TTAAATGGTG ATTGTTCTGT GATGCCGATT
ATTCTGTTTA TGGAAGATCA CAAAGCAGAA ACCATTAATC GTGTGGTTGA TGCGGTAAAA
GCCTATCGTG TTGATTTTGA GACACCTGAA TTGCAATTTA AATTAGCCTC TGGGCCAATT
GGGGTTATGG CCGCTCAAAA TGAAGCGGTT GAAGCATCTC AAGATCCTAT GATGTTATAC
GTGTTCGGGG CCGTTATTCT ATTGTGCTTG CTGAGCTTTA AGTCTTTACG TGCAACACTT
GCGGTGGTTA TTCCTTTGTA TGTGGTATCG GTTTTAGCCC AGGCGTTAAT GACGTATTTG
CAGATTGGTT TAACGGTTTC TACATTGCCG GTTATTGCGC TAGGCGTGGG TATCGGTGTT
GATTATGGTA TTTATATCTT ATCGACTATG AATGCGAAAT TAAAAGCGGG TATGGCTGTG
CGTCAAGCGT ACTTTGAAGC ACTTAAAGAG CGGGGCAGTG CCGTATTGTT TACTGGTGCA
ACCTTAGCCG TTGGCGTAAG TACTTGGGTA TTCTCATCAC TTAAATTCCA AATGGATATG
GGAATTTTAC TCACGTTCAT GTTTATCGTG AATATGATGG GGGCAATTAT TGTATTACCC
GCGTTAGCCA GTGTGTTTTG GCGCAAACAA AAATAA
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| Protein sequence | MSNIIKFLES LIFKNRIAVL LLFLVATIFL GYQSSQLRLD AGFTKNIPLN HDYMQNYMKH
VNDFGGANSI LVSVCDKDGD IFNQNFFDTL KDVHDQLFFI NGVDRSLVKS LFSSSTRFTE
IVEGGFAGGP VIPADFNSSE QRGLDKVSSN IEKAGIVGSL VSDDYQCAMV NAKLLDLDPE
TGEKLDTLAL ADELETQLRG QFETDDISIH IIGFAKMIGD VANGAKDVLV FFAIAIAITA
VLVYFFCKSL MLTVLPLLCS IIAVIWQMGL LTLLGFGLDP MSILVPFLVF AIGISHGVQM
INSVGKEVTK GSSSFDAAKL AFTTLLIPGG VALLSDTIGF MTLLVIDIGI IRELAITASM
GVAVIILTNL LLLPVLMSFV KFSEKYKQKF AGKENRADKF WDGIAACSSP KVAIVILVVT
AVLFGFGWMQ AQKMKIGDLH AGAPALHASS RYNQDTFLIT DKYEISTDYM SILVEATKDA
CTSYDVMNSI DELQWRMSNI EGVQSAVSLA SVAKIINAGY NEGNAKWRVL PRNQQTLVQD
IARVDTSSGL LNGDCSVMPI ILFMEDHKAE TINRVVDAVK AYRVDFETPE LQFKLASGPI
GVMAAQNEAV EASQDPMMLY VFGAVILLCL LSFKSLRATL AVVIPLYVVS VLAQALMTYL
QIGLTVSTLP VIALGVGIGV DYGIYILSTM NAKLKAGMAV RQAYFEALKE RGSAVLFTGA
TLAVGVSTWV FSSLKFQMDM GILLTFMFIV NMMGAIIVLP ALASVFWRKQ K
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