| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1990 |
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| Symbol | |
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| ID | 4172125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2420721 |
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| End bp | 2421185 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054998 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_661562 |
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| Protein GI | 109898307 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1956] GAF domain-containing protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0273929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACATTAA GCAAAACAGA CCTTTACCAA GAGGTCGCTC AGCAAGCGCA GGCCTTGATG
GCCGGTGAAA AAGATTTAAT TGCGAATTTG GCTAATTTGA GCGCGCTGAT GTATATGCGT
TTACCTGAGC TTAATTGGGC CGGTTTTTAT TTACTCAAAG ACAATGAATT GGTGTTAGGT
CCGTTTCAAG GTAAGCCTGC CTGCATCCGC ATACCAATGG GACGCGGTGT GTGCGGTAAA
GCTGCTGAAA CGGGGTTATC TCAGTGCATT CATGATGTGC ATGCTTTTGA CGGGCATATA
GCATGTGACG CTGACTCTAA CGCAGAAGCG GTGCTGCCTG TATATCAAAA GGGACAATTG
CTTGGCGTGA TGGATCTTGA TAGCCCTCAC ACGGGGCGAT TCGACCAAGA TGACATGACC
GGTTTACAAA ACTTGGTCAA CATATTGCAG GATGCAATTG CATGA
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| Protein sequence | MTLSKTDLYQ EVAQQAQALM AGEKDLIANL ANLSALMYMR LPELNWAGFY LLKDNELVLG
PFQGKPACIR IPMGRGVCGK AAETGLSQCI HDVHAFDGHI ACDADSNAEA VLPVYQKGQL
LGVMDLDSPH TGRFDQDDMT GLQNLVNILQ DAIA
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