Gene Patl_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1984 
Symbol 
ID4172119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2411329 
End bp2411631 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content43% 
IMG OID638054992 
ProductISCps7, transposase 
Protein accessionYP_661556 
Protein GI109898301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGTCT ATGTAATTGC CTTAGTCGGT GTGGCTCCCA TGAATCGCGA AAGTGGGCGC 
TATAAAGGGT TGCGGAAAAT CCAAGGTGGC AGACATCAAG TCAGAACCGT TTTGTACATG
GCGATGATGT CAGCGATACA AAGTAACCCC GTATTTAAGG TAACATATCA ACGATTAGTC
GCAGCAGGAA AACCTAAGGA AGTGGCTATT ATTGTGTGCA TTAGAAAGAT GGTTGTTATC
TTAAATTCAA TGCTCAGAAA GGGGTCATGT GGGAAGAGCC AAAGGCTACA AATTAGCTAT
TGA
 
Protein sequence
MGVYVIALVG VAPMNRESGR YKGLRKIQGG RHQVRTVLYM AMMSAIQSNP VFKVTYQRLV 
AAGKPKEVAI IVCIRKMVVI LNSMLRKGSC GKSQRLQISY