| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1978 |
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| Symbol | |
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| ID | 4172113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2402470 |
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| End bp | 2403672 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054986 |
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| Product | homoserine O-acetyltransferase |
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| Protein accession | YP_661550 |
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| Protein GI | 109898295 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2021] Homoserine acetyltransferase |
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| TIGRFAM ID | [TIGR01392] homoserine O-acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.77768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTTAA CCCAGGTATT TAACAAAGGT CTTTTGGCCG CCTTTAGCCT AATCATGTGC
GCGCAGGCGT ATGCAGCATC GGTCGAATTA GTCGAGAAAA AGCGCTTTGA AATAGAAAGT
TTCGAAACCT TCGGCGGTAA AACCATCAAG CAGGTACACG TCGGTTGGGA AAGCTACGGT
ACATTGAATC AAGCAAAAGA CAATGTGGTG CTGATCACCC ATTACTTTAG TGCGACTTCA
CATGCCGCAG GTAAATATCA TCCGGATGAA GCAACGCCGG GATATTGGAA CGGCATAATA
GGCCCAGGTA AAGCAATTGA TACCGACAAA TACTTTGTTT TAAGTGTTGA TACACTCGCA
AACTTAAATG CTTACGACCC CAATGTGATC ACCACTGGGC CTGCGTCTGT TAATCCGGAT
ACAGGAAAAC GCTATGGGCT AACGTTTCCT GTGGTGACTA TTCGCGACTT CGTAAACGTG
CAAAAATCAT TGCTTGAATC GTTAGGCGTA ACCAAACTAC ATGCGGTGGT TGGTGGTTCA
ATGGGGTCTA TGCAAGCGTT AGATTGGGCG ACGGCTTATC CTGAATGGGT GCCTAGAATG
ATCTCAGTGA TAGGCTCAGG TCAAAGTGAT GCATGGACCA CCGCCTTGCT AGAAAAATGG
GCAATACCCA TTCAACTGGA CGCCAACTGG AAGAACGGTG ATTACTACGA TAGTACACCG
CCAACCCAAG GGTTAATTGC TGCGTTAATG TTCATTACCC AAGACGCACT TACACCGACT
TTTTTTAATC AAACAGGTAA AGGCATAGGT TACTTTGCCC TTGAAGAAGC GCCGTTAAAC
GACATTCGCC AGCAGCATAG TATTGTTAAG TGGTTAAAAA AACGAGCTCA AAGCCGAGCT
AAATTGATGG ATGCTAACCA TCTATTGTAT TTAGTGCGGG CCTCACAGCT TTATATGGCA
GGCCATTCAG GTGACATGAA ACAAGCGCTA TCCTCAGTCA AAGCAAAAAC GCTCTTTCTG
CCATCATTCA ATGACTTGTT GTTGATGCCC TATTTAGCCA AAGACACGGC AAATTCCTTA
GAGCAACTCC ATAAAAATAC CACTTACCGT GAGTTAACTG GCGACCTAGG CCATCTCAAT
GGTGTAGTAG GTATCGAACA AGCGGCGTCA GACATCAGCG CATTCTTAGC TGACAAACAA
TAG
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| Protein sequence | MFLTQVFNKG LLAAFSLIMC AQAYAASVEL VEKKRFEIES FETFGGKTIK QVHVGWESYG
TLNQAKDNVV LITHYFSATS HAAGKYHPDE ATPGYWNGII GPGKAIDTDK YFVLSVDTLA
NLNAYDPNVI TTGPASVNPD TGKRYGLTFP VVTIRDFVNV QKSLLESLGV TKLHAVVGGS
MGSMQALDWA TAYPEWVPRM ISVIGSGQSD AWTTALLEKW AIPIQLDANW KNGDYYDSTP
PTQGLIAALM FITQDALTPT FFNQTGKGIG YFALEEAPLN DIRQQHSIVK WLKKRAQSRA
KLMDANHLLY LVRASQLYMA GHSGDMKQAL SSVKAKTLFL PSFNDLLLMP YLAKDTANSL
EQLHKNTTYR ELTGDLGHLN GVVGIEQAAS DISAFLADKQ
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