| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1909 |
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| Symbol | |
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| ID | 4172755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2309153 |
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| End bp | 2309944 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054917 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_661481 |
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| Protein GI | 109898226 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTAT TGAATTTTAT ACAGTGGGAT GATTTGCAGC AATTTGAGGT GATGCCCCAG
CCCGTGGTCG CGCGTATTGA GAAGGTGAAT AACAGCCATG AATTGCCGCT GCACACCCAT
TCGAAGGGGC AACTAATACT CGCGCTGCAC GGGCATGTCA CCTGTGAAGT ACAGGGGAAA
ATGTGGATGG TACCAACCCA GAGCGCAATT TGGATACCCA CTCACACTCT TCACAGTAAT
CGTGCATCTG ATCATGCTGA GCTGTGCCAC GTGTTTATTC AACCTGGCGA ACTGCGCATG
CCTGACAAAA CCTGTACATT CGCGTTAAGC GTATTGGCCA AGGAACTAAT TTGCCATTTT
GCCAAGCAAG ATCAGCATTA CCCACACTTT AGCCCGACAA ACAGATTAGC TCAGGTTCTG
ATAGACGTCG TCAGTGAATC CCCCCAACAA CCTATGAATT TACCTTTACC CAGTCACCCC
ACGGTGGCTA AGCTCGCCCA GCAGCTTTTG TCTTATCCCG ATGACAAAAA AACGCTTCCC
CAATGGGCGA GCTACTTCGC TATGTCTGAA CGCACGCTAG CACGATTAAT AAAGCGCGAA
ACAGGCATGA CCTTCGGCCA CTGGCGAGCT CAAATGCACG TGATCATTGC CGTGCAAAAA
CTGATGACCA ACATGACCGT ACAAAGAGTA TCTGAATACT TAGGTTACAG CTCTGTCAGT
GCCTTTATTA CTATGTTCAA AAATATTCTA GGGGAATCGC CAAAGCGATA TATAAAGCAG
CGAGTTGATT AG
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| Protein sequence | MSLLNFIQWD DLQQFEVMPQ PVVARIEKVN NSHELPLHTH SKGQLILALH GHVTCEVQGK
MWMVPTQSAI WIPTHTLHSN RASDHAELCH VFIQPGELRM PDKTCTFALS VLAKELICHF
AKQDQHYPHF SPTNRLAQVL IDVVSESPQQ PMNLPLPSHP TVAKLAQQLL SYPDDKKTLP
QWASYFAMSE RTLARLIKRE TGMTFGHWRA QMHVIIAVQK LMTNMTVQRV SEYLGYSSVS
AFITMFKNIL GESPKRYIKQ RVD
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