Gene Patl_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1902 
Symbol 
ID4172748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2300730 
End bp2301173 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content45% 
IMG OID638054912 
Producthypothetical protein 
Protein accessionYP_661476 
Protein GI109898221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.266524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTATG TGGACTTGAA TCCCATTCGT GCAAAAATGG CAAAAACACC CGAAACGTCA 
AAGCACACCA GTATCAAAAA ACGTGCTCAG GCGGTTAAAA ATAAACGAGA GCAACCGAGT
GCTTTAATGC CGTTTGTAGG AAATCATCGT GAAAATATGC CTCAAGGTAT CGCTTACTCA
CTCAAAGGCT ATTGTGAATT GGTAGACACA ACAGGCCGAT GCATTCGAGG TGATAAGGCC
GATCATATTG ATAACACTCA CAGTCCTATT CTACAAAGAT TGGGATTAGA CGCTGCTCAG
TGGTTAACCT TAACCACTGA GTTCGAAAAA CACTTCTGCT ACGCAGCTGG CGCGGAGCAA
ATGATGAATG CGTTTAAGCG CCATACCCAT CATCAACGGC TGCGAGGAAT GACCAAAGCG
AAAGCGTTGT TAAGGCGCGC CTAA
 
Protein sequence
MAYVDLNPIR AKMAKTPETS KHTSIKKRAQ AVKNKREQPS ALMPFVGNHR ENMPQGIAYS 
LKGYCELVDT TGRCIRGDKA DHIDNTHSPI LQRLGLDAAQ WLTLTTEFEK HFCYAAGAEQ
MMNAFKRHTH HQRLRGMTKA KALLRRA