| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1890 |
|---|
| Symbol | |
|---|
| ID | 4172735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 2287170 |
|---|
| End bp | 2287613 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638054899 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_661464 |
|---|
| Protein GI | 109898209 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0896786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTATG TGGACTTGAA TCCCATTCGT GCAAAAATGG CAAAAACACC CGAAACGTCA
AAGCACACCA GTATCAAAAA ACGTGCTCAG GCGGTTAAAA ATAAACGAGA GCAACCGAGT
GCTTTAATGC CGTTTGTAGG AAACCCTCGT GAAGAAATGC CCAAAGGCAT CGCTTATTCA
CTTAAAGACT ATTGTGAATT GGTAGACACG ACAGGCCGAT GCATTCGTGA GGACAAGGCC
GGTCATATTG ATAACACTCA CAGTCCTATT TTACAAAGAT TAGGATTAGA CGCTGCTCAA
TGGCTAACAT TAACGACCGA GTTTGAAAAA CACTTCTGCT ACGCAGCAGG TGCGGAGCAA
ATGATGAATG CATTCAAGCG CCACACCCAT CATCAACGAC TGCGGGGAAT GACCAAAGCA
AAAGAATTGT TAAAGCGTGC TTGA
|
|---|
| Protein sequence | MAYVDLNPIR AKMAKTPETS KHTSIKKRAQ AVKNKREQPS ALMPFVGNPR EEMPKGIAYS
LKDYCELVDT TGRCIREDKA GHIDNTHSPI LQRLGLDAAQ WLTLTTEFEK HFCYAAGAEQ
MMNAFKRHTH HQRLRGMTKA KELLKRA
|
|---|
| |