| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1885 |
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| Symbol | |
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| ID | 4172730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2279874 |
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| End bp | 2281577 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054894 |
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| Product | gamma-glutamyltransferase |
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| Protein accession | YP_661459 |
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| Protein GI | 109898204 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0405] Gamma-glutamyltransferase |
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| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.280789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTT CATTCGTGTT ATTTTCAATT TTTATGCTCA GCGCTTGTGG AGCTCAGCAA
GAGCAGGGCG CAGCAAAAAC ACAAAGCCAG CATGACACCT CAGCAGCGCA GCAGCAAAAA
GCGGCAGTCG CTATGCCCGA TGCCTTTAGT GCGGACGTGG CAAAGCAGAT CATGCAAAAA
GGTGGAAACG CGGTTGATGC CGCAATAGCT GCACAATTTG TGCTTGCGGT CACATTACCT
GAAGCAGGCA ACATTGGCGG TGGTGGTTTC ATGCTGGTGT ACAAAGACAA GGAGTCTGAC
TTTATCGACT ATCGCGAGCA AGCGCCACTT GCAGCCCATC GTGATATGTA CCTTGATGCA
CAGGGTAATG TGGTGCCATA TCAATCTGTG ATTGGCATTT TATCATCAGG CGTACCCGGC
ACAGTGGCGG GCATGTGGCT AGCCCATGAA AAGTACGGCA CATTGCCGTG GAAAGACCTA
GTCGACCCTG CCGTTAAATT AGCGAAGGAT GGCTTCGTCA TGCCCGAAAA ACTCGCTGGT
TACATTGGCC GTTATAGCAA GCGGTTAAAA GACAAAGGCT TTGAGGTCAA TTTTGATGAT
TATTTCGCGT CTGCCAAAAC AGGGGAAGTG TTTAAACAAG CTGAGCTTGG CGCAACGTTA
GCACTTATTC GCGATCAAGG ACGTGATGGT TTCTATAAGG GGAAAACAGC AAAAATCATC
GCTGATTTTA TGGCTAACCA TAAGGGCCTG ATCACAGAAC AAGATTTAGC AGAGTATGAA
GCTAAAGCTC GCCAACCTAT CAGTGCAAAA TGGCGTGAAT ACGATGTGCT AACCTCACCA
CCACCGAGCT CAGGCGGTAT CGCGATAATT CAGTGGTTAA CCATGTATGA CCAGCTCACC
AAGGGCAAAG ACAAGCTCGA GCATAATTCT GCGCCCTACA TACATTTATT AGCAGAGGCA
GGTAAACGCG TGTTTGCCGA TAGAGCTGAG TACTTAGGGG ACCCAGATTT TGTTCAAGTG
CCGGTATCTG AGCTAATTGA CCCAAATTAC ATTGCTAAGC GCGGCGCTGA TATCAGCATG
GACAGCATCT CAGTCACTGA GTTAATCAAG CCAGGTTTGA AAGAAAGCGA AGAAACCACG
CATTTTTCGA TTGTGGATAA ATGGGGCAAT GCAGTGTCAA ACACCACCAC GATCAACTTA
GGGTTTGGCA GTGGTGTGGT GGTAGAAGGC GCAGGCTTTT TATTAAACGA TGAAATGGAT
GACTTCAGTG CTAAGCCAGG GGTAGCAAAT GTGTTTGGTG CAGTTGGCGG CGAAGCAAAC
GAAATTCATC CTAAAAAGCG CATGCTCTCT TCAATGACTC CCACCATCGT ACTCAAAGAC
GGTGAGGTGA GTGTAGTGAC GGGCTCACCC GGTGGCACCA CGATTATTAG CTCGGTTTAT
ACGTCTATTT TGAACGCGTT AGAGTTTAAT ATGAGCGCCC AAGATACCGT GGATGCACCG
CGTTTTCATC ACCAATTATT GCCTAAAGAT GTCATTCGCC ACCATGATGG GATTGCACCA
GAAGTGATTA CATCATTAGA AGATATGGGC TACACCATGG AAGCTCGCCG GTTCGGTGAT
TTACACACGA TCATCAATCG TGGTGGGGAG CTACAAGCCG GCTCTGAGTC CCATGGTAGA
GGCAAATCAA TGGTGTTCGA GTAG
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| Protein sequence | MKFSFVLFSI FMLSACGAQQ EQGAAKTQSQ HDTSAAQQQK AAVAMPDAFS ADVAKQIMQK
GGNAVDAAIA AQFVLAVTLP EAGNIGGGGF MLVYKDKESD FIDYREQAPL AAHRDMYLDA
QGNVVPYQSV IGILSSGVPG TVAGMWLAHE KYGTLPWKDL VDPAVKLAKD GFVMPEKLAG
YIGRYSKRLK DKGFEVNFDD YFASAKTGEV FKQAELGATL ALIRDQGRDG FYKGKTAKII
ADFMANHKGL ITEQDLAEYE AKARQPISAK WREYDVLTSP PPSSGGIAII QWLTMYDQLT
KGKDKLEHNS APYIHLLAEA GKRVFADRAE YLGDPDFVQV PVSELIDPNY IAKRGADISM
DSISVTELIK PGLKESEETT HFSIVDKWGN AVSNTTTINL GFGSGVVVEG AGFLLNDEMD
DFSAKPGVAN VFGAVGGEAN EIHPKKRMLS SMTPTIVLKD GEVSVVTGSP GGTTIISSVY
TSILNALEFN MSAQDTVDAP RFHHQLLPKD VIRHHDGIAP EVITSLEDMG YTMEARRFGD
LHTIINRGGE LQAGSESHGR GKSMVFE
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