| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1858 |
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| Symbol | |
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| ID | 4173043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2247667 |
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| End bp | 2248884 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054867 |
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| Product | hypothetical protein |
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| Protein accession | YP_661432 |
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| Protein GI | 109898177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACGC AAACAAGCCG TTTAAAGAAG CAGAAAATAA GCGTTATTAA CCGTCTCACT
TGGGTTTTGT CTACGGTTTG TATTTTGCTA TGGAATGGCC ATTCGGTCGC TAAAAATGTT
CCCCTTAGCT ATGAGGTGAA TTATTTGAAG CTATTGAACG CGCCCGTGGC AACGTTCAGC
AATATCAATG TGTTACCTGA AAACAGTGGT TTGCCTGGCG CGCAGTTAGC GGTGGCTGAT
GCTAACTCAA CAGGTAAATT CATTGGTCAA TCTTTCACAT TATCTCAGTT TGAGTTGCAC
GCTCCTCAAG AAGTGCTCAA GCGTATTGAT CAGCAGTTTA AAAAGGGTGT GTTTGTATTT
CTTGTCAGTG CGGACAGCGG TGTGTTTGAA ACCATAGACA AATGGGCGAA AAACAAACCT
GTGCTGGTGT TTAATGTCAG TGAGCCGGCG GATGATATGC GCCACACCTT GTGTTTGTCA
TCTGTGTTAC ACACAGTCCC AAGTTACCGA ATGAAGTCAG ACGCATTGGC ACAATGGCTT
GTGGCAAAAC GGTTATCTAA AATACTGTTG ATCAAAGGCA AGGGAGTGGC CGATGAGCAT
ATAGCATATG CGTTTTCTCT TGCAGCGAAA CGTTTTGGAT TAAACATTAT CGAACAAAAA
GTGTGGGACT TTAACACTGA CTTGCGCCGC AGTACTCAGC AAGAAATTCC GCTATTTACC
CAAACTTCGC GCCCCTATGA TGTGGTCTTT GTCGCTGATG CTCACAAGGA CTTCGCCGAA
TTCATTCCTT ACAACACATA TTTGCCAAGG CCAGTTATCG GTTCAGCAGG GCTAGAAGCA
CTGGCATGGC ATCGAGTCAT AGAGCAGTGG GGGGCGGCGC AATTGCAAAG TCGTTTTCGC
AAAATGGCGG CAAGAGACAT GAATGAATTA GATTTCAGTG CTTATTTGGC AGTGCGAAGT
GTCGCTCAAG CGGCCCAGCA AACAGGTTCA GGTAAACCGG CAGAGTTGAT TGATTATATT
CATTCTGATG ACTTTGAATT GGCTGCATAT AAAGGGCGTA AGCTCAGCTT TCGTTCATGG
AATGGTCAGT TAAGAATGCC TTTGGCGTTG GTGCAACCCA ACGCTTTTGT GTCTGAATCG
CCCCAAGCGG GCATGCTACA TCCCACAAAC GAACTTGATA CCTTGGGTTT TGATGCACGC
GAGATGCGCT GCGAATGA
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| Protein sequence | MNTQTSRLKK QKISVINRLT WVLSTVCILL WNGHSVAKNV PLSYEVNYLK LLNAPVATFS
NINVLPENSG LPGAQLAVAD ANSTGKFIGQ SFTLSQFELH APQEVLKRID QQFKKGVFVF
LVSADSGVFE TIDKWAKNKP VLVFNVSEPA DDMRHTLCLS SVLHTVPSYR MKSDALAQWL
VAKRLSKILL IKGKGVADEH IAYAFSLAAK RFGLNIIEQK VWDFNTDLRR STQQEIPLFT
QTSRPYDVVF VADAHKDFAE FIPYNTYLPR PVIGSAGLEA LAWHRVIEQW GAAQLQSRFR
KMAARDMNEL DFSAYLAVRS VAQAAQQTGS GKPAELIDYI HSDDFELAAY KGRKLSFRSW
NGQLRMPLAL VQPNAFVSES PQAGMLHPTN ELDTLGFDAR EMRCE
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