Gene Patl_1851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1851 
Symbol 
ID4173036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2239658 
End bp2240572 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content44% 
IMG OID638054860 
Producthypothetical protein 
Protein accessionYP_661425 
Protein GI109898170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAACA ATAAAACCCT CTTACATTTT TCAATAGCCG TGTGTTTAGC TTTATCAGGT 
TGTAACCGTG AACAAACACC TGAATCATCA AACTCTACCA GTGAAGCTAA AGGGGAGATG
AATAACGCGG TGAATAACCG TACTTTGGAC GTAAAAGCCT CTGCAGTAGA CGAGCCTGAA
GATGAGTGGG TGTCGCTCTT TAACGGTAAA GACTTGCAAG GCTGGTACAC CTTTGTGAGT
TACCAACCTG AAGACAGCAA TTATCAAGAT CCTGACAACT TGCCTGTTCG CGGTATCAAC
AATGACCCTA AAAATGTGTT CAGCGTGCAT GATGGGATGC TACGTATTTC AGGAGAAGAA
TGGGGCGGTA TCAGCACTAT CAAAGAATAC GAGAATTTTC ATCTTAAATT TGACGTGAAA
TGGGGCGATA AGAAATGGCC CCCCAGAGAA AACTTACCCC GTGACAGCGG TGTATTGTAT
TTTGCGGTAG GAGAGGCTGG CGCATCGATG AATCACTGGA TGCGTAGCCA CGAAATGCAA
ATTCAAGTAG GCGATAGCGG TGATTATCAC AGTCTTGATG GTGTTTTAAT TGATACTCAT
TGCGGCGATG CAAATGACGG AGACTGGCAT TTCTACCGCT ACGATCCGGA TATGCCACTG
TGTAAAGACA TCGCTAACCG TGTATTGAAG TTAGGCGAGT TTGAGAATCC GATCGGCCAG
TGGGACTCCA TGGAAGTTAT TGCAGATGAC ACTATGGTTA TTCATAAAAT TAACGGCCAC
GAGGTGTTTC GTGGTTATCA GTCAAGGCAA GTGATTGATG GGGAACACGT GCCGCTCACA
AAAGGAAGAA TTGAATTTCA ATCAGAGGGA GCAGAAGTCT TTTATCGTGA TATTCGCATA
AAGCAAAACC CTTAG
 
Protein sequence
MANNKTLLHF SIAVCLALSG CNREQTPESS NSTSEAKGEM NNAVNNRTLD VKASAVDEPE 
DEWVSLFNGK DLQGWYTFVS YQPEDSNYQD PDNLPVRGIN NDPKNVFSVH DGMLRISGEE
WGGISTIKEY ENFHLKFDVK WGDKKWPPRE NLPRDSGVLY FAVGEAGASM NHWMRSHEMQ
IQVGDSGDYH SLDGVLIDTH CGDANDGDWH FYRYDPDMPL CKDIANRVLK LGEFENPIGQ
WDSMEVIADD TMVIHKINGH EVFRGYQSRQ VIDGEHVPLT KGRIEFQSEG AEVFYRDIRI
KQNP