| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1831 |
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| Symbol | |
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| ID | 4173016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2205665 |
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| End bp | 2206564 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054840 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_661405 |
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| Protein GI | 109898150 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00149577 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATTA TCGACCCACA TCTGCACCTT TTTAACCTAA GTGATGGTCA ATACAGCTGG
TTAAAACCCG AAAATCCCCC CCACTGGCCA GACAAAAACA CTATTCATCG TGACGTTAAT
CAAGCTGAAC TGCAGCTAGA TTCTGGGTTG GATCTAGCCG GTTTTGTGCA CATTGAGGCG
GGTTTTGACA ACGCTCAACC GTGGCGAGAA CTTGATTGGC TAGCACAACA CTGCACCCTG
GCCTTTAAGA GTGTGGCAGG TGGTGATCTA ACATCTGAGC AATTTCCCGA GGTGTTGGCT
AATTTGCGAC GCCGACCGTC ACTTGTCGGT GTTAGGCACA TTCTTGATGA CGATGCTCAC
GCCTTGCTAA GCAGCTCGGT GTTTCGAAAA AACTTGGCCC TGTTGGCTGA GCATGGTTTG
AGTTTCGATG CGCAGTTTTC ATTATCGGAT TCTCAAGCCA CACAAGTGCT ATGCAAGGTG
CTTAATAATA CACCAACCTT ACGCGTGATC ATCAATCATG CAGGTTGGCC GCCTCTTCAA
TCTAATACCC ATAACTGGCT GCAAGCCTTT GACCGATGGC AACACAACCT TGGTGCACTC
GGGCAATACC CAAATGTGGC AATAAAGCTT TCTGGCTGGG AAATGCAGAA TCGTGCGTAC
ACTGAAGCAG ACATGCAAAC AGTGATGATG GCCTGCTTAC AAATACTGGG TGAGCGCCGA
GTGATGCTTG CCAGTAATTT TCCGCTAACT ACCTTCAGCC AATCTTATGC TGACTTGTGG
CAAACTTATG GCGCACTTTT AACGTCAGTC GAAGTGCATG AACCTGCCCA AGCAGAGCCA
GATAACAGAT TAAAAAGCCT ACTGCTGTAT AAAAACAGTG CGAGTTGGTA TCAATTTTAA
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| Protein sequence | MDIIDPHLHL FNLSDGQYSW LKPENPPHWP DKNTIHRDVN QAELQLDSGL DLAGFVHIEA
GFDNAQPWRE LDWLAQHCTL AFKSVAGGDL TSEQFPEVLA NLRRRPSLVG VRHILDDDAH
ALLSSSVFRK NLALLAEHGL SFDAQFSLSD SQATQVLCKV LNNTPTLRVI INHAGWPPLQ
SNTHNWLQAF DRWQHNLGAL GQYPNVAIKL SGWEMQNRAY TEADMQTVMM ACLQILGERR
VMLASNFPLT TFSQSYADLW QTYGALLTSV EVHEPAQAEP DNRLKSLLLY KNSASWYQF
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