| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1823 |
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| Symbol | |
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| ID | 4172071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2192680 |
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| End bp | 2193705 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054832 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_661397 |
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| Protein GI | 109898142 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.288921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAGTA ACAAAAAATT GACCTTGAAC GACTTGGCTG GTCTGGCTGG GGTGTCTGCA
TCTACAGTAT CTCGCGCGTT GAGTGACAAC CCTTTGATTA AAAAAGACAC GCGGGTACGC
ATTCAAGCGT TAGCGGCGTC ACACAATTTT AGTATCAATA CCGCCGCAAG TCGTTTACGC
ACCCAAAAAA CCAAAGTAGT GGCGGTTATT CTTAACCTAA TCGATCACAC TGAACAGAGT
ATCAGCGACC CGTTTTTATT GAAAATTGTG GGCGATCTAA ACCAAGCCTT AAATACCAGA
GGCTATGACT TATTGTTATC TAATTCGTTT ATGGCCACAG ACAATTGGGC TAACTATTTT
ATTAACAGTC AGCGTGCAGA TGGTCTTATC GTTGTAGGCC AAGGCAAGAG TGATGAAAAA
GTAAAAGAAG TGGCTGAATC TGATGTACCT ATGGTGGTAT GGGGCGATCC AAAAACCGAG
TCTAATTATG CCGCTGTCGG CAGTAATAAT CATTTAGGCG GCGAGATCGC CACACAACAT
TTGATTACTG GTGGATGCAA AAATATCTTA TTCTTGGGCG ACCCTGAGCA TATGGAGATG
ACTGGACGTT ACCGGGGGTA TCAAGATGCG CTTGAAGCGC ACTCGATCAC ATTTGACCGG
GCATTCACCG TCGCATGTGA CATTACTAGC AGTGCAGCAT ATGCCAAAAT CAGTGAACTT
ATTTTATCCA AAGGGCTGTT TTTCGACGGC ATCGTCGCTT GTAGCGATAT GGTTGCCTTA
GGCGCAATGC GCGCATTGAA AGAACGTTAC ATTGGCATTC CTAGCGACGT TGCTATCGTT
GGGTTTGATG ACATTATGAT GGCTGAATTG TCGTACCCTT CATTAACAAC GATTAAACAA
AATACCCAGC GTGCTGCACA AGTGATGGTC GACAAGCTAA TTGCGCAGTT TGAAGGTAGA
AAAGTCGACT CTTCTTTGAT AGACATCGCA CTAGTGGCGC GTCAATCAAC GAAACATAAC
CCGTAA
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| Protein sequence | MKSNKKLTLN DLAGLAGVSA STVSRALSDN PLIKKDTRVR IQALAASHNF SINTAASRLR
TQKTKVVAVI LNLIDHTEQS ISDPFLLKIV GDLNQALNTR GYDLLLSNSF MATDNWANYF
INSQRADGLI VVGQGKSDEK VKEVAESDVP MVVWGDPKTE SNYAAVGSNN HLGGEIATQH
LITGGCKNIL FLGDPEHMEM TGRYRGYQDA LEAHSITFDR AFTVACDITS SAAYAKISEL
ILSKGLFFDG IVACSDMVAL GAMRALKERY IGIPSDVAIV GFDDIMMAEL SYPSLTTIKQ
NTQRAAQVMV DKLIAQFEGR KVDSSLIDIA LVARQSTKHN P
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