| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1805 |
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| Symbol | |
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| ID | 4172053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2169191 |
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| End bp | 2169901 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054815 |
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| Product | HxlR family transcriptional regulator |
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| Protein accession | YP_661380 |
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| Protein GI | 109898125 |
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| COG category | [K] Transcription |
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| COG ID | [COG1733] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.843769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATACAA CCCCCTATGG GCAGTATTGC CCACTAGCAA TGTCTGCAGC TTTTCTATGC
AATAAATGGA CATTATTGAT CTTTAGAGAG TTACTGTTTG GTTCAACAAA CTTTAATGAC
ATAAGCCGAG GAGTGCCGCG AATGTCGCGC ACATTGCTGT CGAACCGCTT GAAAGAGCTG
GTCAATATTG GCTTGATAAC GCGCCAAGAA AAGCAGGCAA CAGGACAAGT TGATTATGTG
TTGACTGAAT CAGGTAAAGC CCTTGAGTCA GTGGTTTTCT CGATGGCTAG CTGGGGGCAG
GAGTGGTTAG AAACCGAGCC ATCATTGGAT AATATTGATG GTAGTTTCTT GATGTGGGAC
ATTCGACGTA ATGTGAGAAT ACATGAGGAT TTGCCTAACC TTTTTATTGC CCATTTTTTG
CTGACTGACA TGCCTGAGAA TAAAAGCGAG TATTGGTTGA TATTCGAAAA TGGGCAAGTG
GATTTATGTT ACGTGGACAG AGGGTTTAAT GTAGATGTAA ACATTGAAGT GGCTGCGCGC
GAACTTACCA AAATTTGGAT GGGCTGGGAG GATTTTTCCG CTGCAGTCAA AGACCACACA
TTGAAATTCA GAGGACCTAA AAAATACACC GAAATTGCCG AGTATTGGCT AGGTTGTAGC
ACGCTTGCGC ATATCAAAAA ACGCGAAGGG CACTTACTCG TGTCTGAGTA A
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| Protein sequence | MNTTPYGQYC PLAMSAAFLC NKWTLLIFRE LLFGSTNFND ISRGVPRMSR TLLSNRLKEL
VNIGLITRQE KQATGQVDYV LTESGKALES VVFSMASWGQ EWLETEPSLD NIDGSFLMWD
IRRNVRIHED LPNLFIAHFL LTDMPENKSE YWLIFENGQV DLCYVDRGFN VDVNIEVAAR
ELTKIWMGWE DFSAAVKDHT LKFRGPKKYT EIAEYWLGCS TLAHIKKREG HLLVSE
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