| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1722 |
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| Symbol | |
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| ID | 4171931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2058085 |
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| End bp | 2058597 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054732 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_661297 |
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| Protein GI | 109898042 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAAC GCATGAACAA ACGCATTTTA CTTACTGCTG CTGCCGCCGC TTTATTCAGT
GTCAACAGCT TGGCAGAAGT GACGCGTCAC GCCTTACCAA ACAACAATCC GTTTCCCATT
TCTCGCGCAG TGGAGGTTAC GCCTGACACC ACGTTAATTT TCCATGCGGG TATGACACCA
GGCCCTGTAA ATCCTGACGC TGAAAAGGGC AGCCGCGAAT ATTACGGCGA TACCGAAACC
CAAGCCTTGA GTGTGTTTAA ACGTCTAGAA GGCTCGTTTA AAGACTTAGG CGTTGATTTT
GGCGATGTCG TCAAGATGCA AGTGTTCATG GTCGGTGACC CAACCATGGA CGGAAAGATG
GACTTTGGCG GTTTTATGAA AGCATACACC AAGTACTTTG GTACGAAGGA GCAGCCAAAC
AAACCATCAC GTTCGGCTTT TCAAATAGCA GGTTTGGCTG GTGGCCCGAA CATGTTGATA
GAAATTGAAG TGGTACTGGC CAAGCCAGAG TAA
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| Protein sequence | MIKRMNKRIL LTAAAAALFS VNSLAEVTRH ALPNNNPFPI SRAVEVTPDT TLIFHAGMTP
GPVNPDAEKG SREYYGDTET QALSVFKRLE GSFKDLGVDF GDVVKMQVFM VGDPTMDGKM
DFGGFMKAYT KYFGTKEQPN KPSRSAFQIA GLAGGPNMLI EIEVVLAKPE
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