Gene Patl_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1721 
Symbol 
ID4171930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp2057452 
End bp2058066 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content47% 
IMG OID638054731 
Productcytochrome c, class I 
Protein accessionYP_661296 
Protein GI109898041 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTTA AATCAACACT TTTTGCTTTA TTGCTGGCGG GTAACGCCAG TGCATTGCAT 
GCCTCTGAAG CTATTACACC TGAAGGCCTC GAATATTGCA CTGTCTGCCA CGGTAGCCAA 
CTGAAGGGGA ATGCCAATAT TCAAGCCCCA AGATTAGGTG GGTTATCAAA GTGGTATATC 
GAGCGCCAAC TCAATAATTT CAAGCAAGGC ATTCGTGGAG CCCACACCAA TGATGTGACA 
GGCAGTGAAA TGCAAGCCAT GGCACGTCAC TTAACGCCAA GTGATATCTC TGCCATTGCC 
AGTTGGATTG GTCAAACCGA ATCGCCTAAG CCTGCAACAA CCCTTCATGG AGATATTGAT 
GCGGGTAAAA CCTTGTATCA AGCCTGCGCC GCTTGTCACG GAGCGGATGG TGGCGGTAAT 
AAAGCCATAG GTGCGCCGCG CTTAAGTGGC ATTAATGATT GGTATGTACT CACCCAAATC 
AATCATTTCC GTGAAGGTAT TCGCGGTAAT GACCAAAAAG ACATTTACGG ACAACAAATG 
AAAGCCGCTG TTTCGATGGT GCAATCAGAT CCTGATGCGG TGAATCTCGC CGCCTATATC 
AGCCAACTTA AATAA
 
Protein sequence
MSLKSTLFAL LLAGNASALH ASEAITPEGL EYCTVCHGSQ LKGNANIQAP RLGGLSKWYI 
ERQLNNFKQG IRGAHTNDVT GSEMQAMARH LTPSDISAIA SWIGQTESPK PATTLHGDID 
AGKTLYQACA ACHGADGGGN KAIGAPRLSG INDWYVLTQI NHFREGIRGN DQKDIYGQQM 
KAAVSMVQSD PDAVNLAAYI SQLK