Gene Patl_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1718 
Symbol 
ID4171927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2054086 
End bp2054412 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content44% 
IMG OID638054728 
Producthypothetical protein 
Protein accessionYP_661293 
Protein GI109898038 
COG category[S] Function unknown 
COG ID[COG3377] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAAGT TGTTGGGTGT CGCGTTAGGC TTAATGTTAA CTGCTACAGC GCAAGCGGAA 
ACCTTCGATT GGGGTGAGCT TAAACGTGAG CGTATCGAAT TGAAATTACC CTTACTCACA
GTTCAAGGTG AACAAGGTCT ATTAGCGTGT GGTTACGTGG ATGTAAACAC GTGTAATAAA
ACAGGTGAAG CCTGCGCAAT TGTATCAGGG GTAAAAACCC ATGAAGATAT GCTGCAAAAA
CCAGTGTTAT TAGTTTCAAA AGCCGCACGG GAATTAGGTG TTGAACCGGG TATGACAGGC
ACCCAAGCAC TTGAATTAAT GCGCTAG
 
Protein sequence
MVKLLGVALG LMLTATAQAE TFDWGELKRE RIELKLPLLT VQGEQGLLAC GYVDVNTCNK 
TGEACAIVSG VKTHEDMLQK PVLLVSKAAR ELGVEPGMTG TQALELMR