Gene Patl_1709 details

Gene Information

• Locus tag: Patl_1709
• ID: 4171918
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 2042867
• End bp: 2044723
• Gene Length: 1857 bp
• Protein Length: 618 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638054719
• Product: ferrous iron transport protein B
• Protein accession: YP_661284
• Protein GI: 109898029
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0370] Fe2+ transport system protein B
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00437] ferrous iron transporter FeoB

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGTTA ACCTAACGCT CGTTCAATCA AGTTGTGTCA TGAAAAATAT TATTTTAGTG 
GGTAAGCCCA ACTCTGGGAA AAGTCTGTTG TTCAACCAAT TAACTGGGTT ACGTCAGAAA 
GTGGCTAATT TCCCAGGTGT AACCGTTGAG CTCAAAAGTG GTCAATTTGG TGAACATAGG 
TTAATTGATT TTCCAGGCGC TTACTCCCTA AGCACGCTTT CTCGAGATGA AGAAATCGCC 
GTGGAAAAAA TCCACGAAGC CATGCACGAC GCCAATACAG GCGTCATTGT GTGTAACCTT 
GACGCCACTC GATTAGAGCG AAGCTTGGTG TTTGGGTTAC AAGTGCGCGA CCTAGCTAAA 
CAGCATAATA AAGCGTTGGT GTTTGCCTTG AACATGATTG ATGAGGTTGA GCGCTTTAGC 
CACAACGTTG ATTGTGAGAG GTTAGCGCAA GACTTGGGTG CCCCTGTATT TCCTGTGTCG 
GCGAAAACGT TGAGTGGATT ACATGAATTT AAATTAGCAT TACAGGACGT GGTCGCTCGG 
CCCGAAAGCT TTGTGCCAAC CAAAAGCGTA GGTGAAGGCG ATACCGTGTT CAGTATCAGT 
CGTCAAATCG CCAAACATTA CGGCATTCAC GCTGATATCG TATTAAAACA GCAAAACACA 
ATTGATAGCT TCCTACTTAA TAGCGTGCTG GGGGGCGTGG CGTTTTTCGG TATAATGTTC 
TTGTTGTTTC AAAGTATATT TACTTGGGCT ACGCCACTAA TGGACGGCGT CGAAGAAATC 
ATTGGCTGGT TAGCGGTTGC TGTTACTTCT GCAATTGGTC CTGGCCTTAT CAACGATTTT 
CTGCAAGACG CCATTTTTGG TGGCTTAGGC TCATTTCTTG TTTTTGTGCC GCAAATAATG 
GTACTCACCT TTATTATCGG GTTATTAGAG GACAGTGGCT ACCTTGCTCG CGCAGCGCTA 
ATTTGCCATA AACCGTTGAG TTATTTTGGT CTATCAGGGC GTAGCTTCAT ACCGTATTTA 
TCAGGTCACG CCTGCGCTAT CCCTGCCATT ATGGCGGCTC GCACTATTGA ATCTCCTCGT 
AAGCGCTTGA TCACCATGAT GACCATTCCA CTGATGTCTT GTTCAGCGCG CTTACCCGTT 
TATGCCTTGC TTATCGCGGT TCTGATTCCA GACACGACTT ACTTAGGTGG GCTTTTAAGC 
CTGCAGGGAA CGGCATTTTT TGTACTCTAC TTTCTTGGAA TTGTCACCGC ACTGCTAGTA 
AGCGTGCTAT TGAACAAGTT TACCAACAAG GATGCTGACA AAGCCGAAAT GCCCTTTATA 
TTGGAGCTGC CCAATTATAG TTTACCGCAC TGGAAGCCAC TTTTATTTCG GGTGGTCACC 
AGTGCGAAGC AATTTATTCG CAGGGCAGGG CCGGTCATTT TCATGGTGTC TGTGGTTATC 
TGGTGCTTAG GGTATTTCCC AAGTTCAGAG CATGCGTTAG AGGATTCTTA TCTAGCCATG 
ATAGGCCAGT GGATAGAGCC TATTTTTGCG CCTTTAGGCT TAGATTGGCG CTACGGCGTA 
GCCATTTTGG TCTCCTTCCT GGCAAGAGAA GTGTTCGTTG GGGCACTCGG GACCTTGTTC 
GGTATTGAAG GGGCCGATGA GAACATTGCT GGCCTTGCGA CAAATATTCA AGCTGACGGC 
TTAACCTTAG GCGCAGGGCT CGGCTTACTG ATATTCTATG TTATCGCCTT GCAATGCGTT 
GCCACGGTAG CAACCTTAAA AGGTGAAACG GGTAGCAAAA AAATTGCTTG GGGATTGTTC 
GCTGGCTATG GTTTGCTAGC CTATGCTGCG GCTTTTTTTG TTTCGCATAT TTTTTAA 

 

Protein sequence

MGVNLTLVQS SCVMKNIILV GKPNSGKSLL FNQLTGLRQK VANFPGVTVE LKSGQFGEHR 
LIDFPGAYSL STLSRDEEIA VEKIHEAMHD ANTGVIVCNL DATRLERSLV FGLQVRDLAK 
QHNKALVFAL NMIDEVERFS HNVDCERLAQ DLGAPVFPVS AKTLSGLHEF KLALQDVVAR 
PESFVPTKSV GEGDTVFSIS RQIAKHYGIH ADIVLKQQNT IDSFLLNSVL GGVAFFGIMF 
LLFQSIFTWA TPLMDGVEEI IGWLAVAVTS AIGPGLINDF LQDAIFGGLG SFLVFVPQIM 
VLTFIIGLLE DSGYLARAAL ICHKPLSYFG LSGRSFIPYL SGHACAIPAI MAARTIESPR 
KRLITMMTIP LMSCSARLPV YALLIAVLIP DTTYLGGLLS LQGTAFFVLY FLGIVTALLV 
SVLLNKFTNK DADKAEMPFI LELPNYSLPH WKPLLFRVVT SAKQFIRRAG PVIFMVSVVI 
WCLGYFPSSE HALEDSYLAM IGQWIEPIFA PLGLDWRYGV AILVSFLARE VFVGALGTLF 
GIEGADENIA GLATNIQADG LTLGAGLGLL IFYVIALQCV ATVATLKGET GSKKIAWGLF 
AGYGLLAYAA AFFVSHIF