Gene Patl_1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1703 
Symbol 
ID4171912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp2036798 
End bp2037391 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content44% 
IMG OID638054713 
Producthypothetical protein 
Protein accessionYP_661278 
Protein GI109898023 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATGT TTAGCATTTT TCTAATGATA GGGTTGATTT CTGGCTGCAG TTCATCCTCT 
GCCCCAAATA GACAGATATA TTTATTGAAC AGCGACGCGC CGTTGATCAC GATAAACAAT 
CCCGAGATTG AGAAGGTCGT TATATTGGAC AAAATACAGC TTGCCGATTA TCTCAAACGG 
CCTAATTTAG TGATGCAAAT TCAGGGCAAC AAGCTGTATT ATTCTGACGT GGATCTGTGG 
GCAGAAAGTT TGCAAAATGG GATTCATGAT ACGATGCTTG CGTGGTTAAA CCAGCATGCT 
GAAGCGACAC GTTTTGTCGC TTATGATTCA CCTGAAGCAA ACTTGGGTCA GGAGCATCTT 
ATTTTGAGTG TTCAGTATTT TATGCCGACA GATCAGGGAA CGGTCATTAG CAGTGGTCAG 
TTTTGGCGAA CGGGGAATGG ACGGACGGAT GCGGGTAAAA ACGGGAAAAG TGTATCAACT 
AACAGCTTTT CTTTTACCTC GCCCCTAACC CAGAAAGGGT ACAGCCATAG CGTGGCGCTA 
CTTGCAGAGC AATTATCGCA ATTGAGTTCC CAGATCGTGA GCGATTTTGA GTAA
 
Protein sequence
MKMFSIFLMI GLISGCSSSS APNRQIYLLN SDAPLITINN PEIEKVVILD KIQLADYLKR 
PNLVMQIQGN KLYYSDVDLW AESLQNGIHD TMLAWLNQHA EATRFVAYDS PEANLGQEHL 
ILSVQYFMPT DQGTVISSGQ FWRTGNGRTD AGKNGKSVST NSFSFTSPLT QKGYSHSVAL 
LAEQLSQLSS QIVSDFE