| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1689 |
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| Symbol | |
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| ID | 4172280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2021162 |
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| End bp | 2021947 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054698 |
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| Product | peptidase M23B |
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| Protein accession | YP_661264 |
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| Protein GI | 109898009 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.708737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTAGAC ATTGGTTAGT TATCGCACTT TTATCTTGTG TCTCACATGT CACCCAAGCC
TACTGCATAG ATGATTGGGC ATGTTTTGAA AAGGTTAAGC ACGACGAGGT AATAGAATAC
TGGTTAAGCA ACAACAAGCC CTACCCCATC ACCTCTACGC TCGATGTGAG AACACAAAAC
CTTAAAACCG AGAATGCAGC TAAAGAGCGA TACATCAAAA CATTGGTTTT AGGACCCTTA
GAGCGCGTTA AAATTTTGAC GTTGCAGCCG ATTGATAGCG CTCGCCCATT GCATAGCAAA
GAAGATTTTT ACTGGACCCC AGGTATCGAA GACGCCCAAC ACGATGATAG TTACCAATAT
GCGTTACCTT ATGCAAAGGG CCAGACATTT AGGGTCATGC AAGGATTTAA CGGCGGCTAT
AGCCACCAAG GGGCATCGCG ATACGCTGTG GATTTTGCAA TGCCAATAGG TACGCCTATC
CATGCGGCAC GTGGTGGTCA GGTGATCGAC TTACAGCAAA AACATGACAG AGGTGGTGCC
GCTAGGAGTT TCGCCAGATA CGCTAATTTC ATCACTGTAC TGCACGATGA CGGCACGACA
GGTGAATACT ATCATTTGCG CCTAAATGGT GTAGTGCCTA CCCTTGGACA AGATATTAAA
CGAGGACAAC TTATTGGTTA TTCAGGTAAT ACCGGCTTCT CCTCCCTGCC CCATTTGCAT
TTCGCTGTCT ATCAAGCCAA AAGTTTTGGT AAGTACCAAT CAATAAAAAT AACGTTTGAG
AAGTGA
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| Protein sequence | MVRHWLVIAL LSCVSHVTQA YCIDDWACFE KVKHDEVIEY WLSNNKPYPI TSTLDVRTQN
LKTENAAKER YIKTLVLGPL ERVKILTLQP IDSARPLHSK EDFYWTPGIE DAQHDDSYQY
ALPYAKGQTF RVMQGFNGGY SHQGASRYAV DFAMPIGTPI HAARGGQVID LQQKHDRGGA
ARSFARYANF ITVLHDDGTT GEYYHLRLNG VVPTLGQDIK RGQLIGYSGN TGFSSLPHLH
FAVYQAKSFG KYQSIKITFE K
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