| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1683 |
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| Symbol | |
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| ID | 4172274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2013447 |
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| End bp | 2014274 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054692 |
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| Product | phytanoyl-CoA dioxygenase |
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| Protein accession | YP_661258 |
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| Protein GI | 109898003 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTCTG TCGATCAGAA AAATGAATTT CGAGCCCAAG GGTATATCGT ATTAAACCAG
CTTTTTTCCA CGGCAGAAAT GGCCTCTTTA AAAAGTGAAG CTGAATCTAT TGTTGAGTTG
TTCGACCCTA ATTCAACTCG TGCTGTTTTT TCTACCCAAG ATCAGAGCAA ATCAAGAGAT
GATTACTTCT TACAATCAGG CGATAAAATC CGCTGTTTTT TTGAAGAGGA AGCCTTCGAC
GAGAAAGGCG ACTTGAAGCA AGCTAAGGCA GTAAGCATTA ACAAAATTGG CCATGCCCTG
CACACGCTAA ACCCCGTATT TAAAGCATTC AGCCACGATC CTAGGATCAG ACAATTAGCA
AGAGATGTAG GGTTATTCAA ACCGCAAATT CATCAATCTA TGTATATTTT TAAACAGCCG
AAGATAGGAG GAGTGATCCG CTGGCATCAA GACGGCACCT ATTTCTTAAG CGACCCCTTG
TCCGTAGTGA CATTTTGGTT TGCAGTGGAA GATGCCACAA TTGAAAATGG CTGCTTACAA
GTTAAGGCCG ATGGCAGTGA TACGCCTCTG CGCGAGCAAT TTATGCGCTT TACCGATGAC
AGCACAGAAT TAAAAGTGCT AGATGACACC CCTTGGCCAA AAGATGAAGA TGCAAAACCT
TTAGAGGTAA AGAAAGGTTC GCTGGTGGTA TTTGATGGGT TACTGCCGCA TTTTAGTGCG
CCAAATCGCT CGGAGAAATC ACGCCATGCT TTTACGCTGC ACATGACGTG TGCTACCACA
AAATATGACC CGCTAAATTG GTTACAAGCC TCGCCCAGTC TTCTGTAG
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| Protein sequence | MLSVDQKNEF RAQGYIVLNQ LFSTAEMASL KSEAESIVEL FDPNSTRAVF STQDQSKSRD
DYFLQSGDKI RCFFEEEAFD EKGDLKQAKA VSINKIGHAL HTLNPVFKAF SHDPRIRQLA
RDVGLFKPQI HQSMYIFKQP KIGGVIRWHQ DGTYFLSDPL SVVTFWFAVE DATIENGCLQ
VKADGSDTPL REQFMRFTDD STELKVLDDT PWPKDEDAKP LEVKKGSLVV FDGLLPHFSA
PNRSEKSRHA FTLHMTCATT KYDPLNWLQA SPSLL
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