| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1673 |
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| Symbol | |
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| ID | 4172264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1999338 |
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| End bp | 2000246 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054683 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_661249 |
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| Protein GI | 109897994 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAGC TCAGAGCGAT TCGATACTTT TGCAAAGTAG TTGAAACCGG CAGCTTCACC
AACGCTGCTA CGACTTTCAA TGTCCCCCCC TCATCTCTGT CACGAAGGGT CGCTGACTTA
GAGCGTTCGT TAGGTGCAAC CTTGCTTAAG CGCTCAACGC GAGTGGTGAG GTTAACTGAA
ATAGGACGAA CCTATTACAA TCAAGTCAAT GATATATTGC GTCAATTAGA GTTAAGTAAT
GACACGGTGC GTAGCTATCA AACAGTACCT ACAGGGCAGC TTAGGATCAG TGCCATGGTT
GAGTTTGGTG AGCCCATATT GTTTCCATTA TTAGAAGAAT TTTCACAGCG TTATCCGCAA
ATTATTCTTG ATGTGCGCCT CAGCGACGAA CTATCGGCCT TGTCCCGAGA CGAAGTAGAC
ATTGCTATAC GAGGCGGGTA TGCGCCCAAT GAGCGCGTGA TTGCAATTAA ATTAATGGAA
AATCAATTTA TTGCCGTTGC CACTAAGGCT TATTTAGAAC GATATGGCAC ACCAAATACA
CCATTGGATC TCAGTCATCA TAAAGGATTG TATTATCGAA CCCCTAATGG TCCATTGCGC
TGGATCAGCG AAATAAACGG CCAATGGCAA GACGTATCCG CCCCACAGGT GGCGGTTTCA
AACAATGGAA AATGGTTATT AGGGAAAGTG CTAGCGGGGC AAGGCATGAT GATGGCGCCC
AAATGGCTGC TTAAGGAATA TCTTGTTTCC GGGGACCTGC AAGAGTTAAG CCTGTCTCCC
GAAATTAACA TCACTTCGAG CAGTGATTTC GGTATTTATC TTTTGTACCA AAAACAGCGC
TATTTAGTGC CAAAAGTCAA AGCAGCAGTG GACTTCCTGG TCGCAAGAAT AAAACAATTG
CATGCTTAA
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| Protein sequence | MDQLRAIRYF CKVVETGSFT NAATTFNVPP SSLSRRVADL ERSLGATLLK RSTRVVRLTE
IGRTYYNQVN DILRQLELSN DTVRSYQTVP TGQLRISAMV EFGEPILFPL LEEFSQRYPQ
IILDVRLSDE LSALSRDEVD IAIRGGYAPN ERVIAIKLME NQFIAVATKA YLERYGTPNT
PLDLSHHKGL YYRTPNGPLR WISEINGQWQ DVSAPQVAVS NNGKWLLGKV LAGQGMMMAP
KWLLKEYLVS GDLQELSLSP EINITSSSDF GIYLLYQKQR YLVPKVKAAV DFLVARIKQL
HA
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