| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1672 |
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| Symbol | |
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| ID | 4172263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1998099 |
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| End bp | 1999316 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054682 |
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| Product | hypothetical protein |
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| Protein accession | YP_661248 |
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| Protein GI | 109897993 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCTAT TTATGCGCGT TAAGCCAACT CAGCACACAA AATTAACGTC TGTTCTGTCT
CCTTTGGACG CTCAGCATAG GGCAGCGCAT CAGGGGAAGA ACCTTTTATT TTTCAGTGGC
GGTAGCGCAT TGCGAAGTTT CTGTCAGCCA CTGATAGAAG CAACGCATAA TTCGGTGCAC
CTTGTAACAC CGTTTGATTC AGGTGGCAGT TCAGCGACCA TTCGTCGGCA TTTTGCATTA
CCAGGCGTTG GAGATATTCG AAATCGTTTA CTGGCCCTAA GTCACAATAT TACGCCGGAA
CAAAACGTTG TAGCTCGCTT ATTGGGTTAT CGATTGTCCT CTATTGCAGC TCAGCACGTT
CTTCGTGAAC ATCTTAAGTC GATGGCAGAA GGCCAAGATC CACTTGTGCG CTCGTTAGAA
ATAGAAAAGC GCCAAATGTT CTGTCATAAA ATGGCTAGGG TTTTGCAATG TTTGCCTGAT
AATTTTGATT TAAACGGTGC CAGTATCGGT AATTTGTTGT TCATTGATAC CCTGTGCGCA
GGTGAAAATA GACTGCAATG TAGCATCGAT TTCTTTCATC AAATGTTGGA TATTCGTGGT
GTAGTCAGGC CGATAGTCGA GTGTAACTTG CAAATAGCCG CAGAACTGCA GGACGGCAGT
ACGGTGATTG GTCAGCATTT ATTAACGGCC AAAGAAACCC CTGTATTGCA TAGCGCTATT
ACCAAACTTT TTTTGTGCGA AAGCGAGGAA AACCCCGAGG CTGTCGATTG TTCTTTGTTA
AGCGAAAATC GCCAATATAT TGAGCAAGCC GATATGATTT GTTATCCACC TGGCAGCTTT
TTTACCAGTA TTGTGGCTAA TTTATTGCCT GTCGGAGTAG GGGATGCTGT CAGCAGAAAC
CCAAATCCAA AGGTCTACAT TCCCAATCTA GGTAATGATC CTGAACAGCT AGGTATGAGC
TTAGAAGATT GTGTTTTGAC TCTCATTAGC TATTTGCGCA AACACACAGA ACAACCTCTT
CCACCAGCCA AATATATCAG TACCATTTTG CTCGATGTAA ATGAGAAATA TTACGCGGGC
GGGATCCCTT TTGAGCGACT CCGTGAGCTG GGAATTAAAG TCGTACAGCG TGATTTAGTG
ACGATGCGCA GTGCGCCGTT TTACAACGAT GAATTGCTGT TAAGAAGTTT ATTAGATATC
TGCAAAAATC ACGTTTAA
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| Protein sequence | MPLFMRVKPT QHTKLTSVLS PLDAQHRAAH QGKNLLFFSG GSALRSFCQP LIEATHNSVH
LVTPFDSGGS SATIRRHFAL PGVGDIRNRL LALSHNITPE QNVVARLLGY RLSSIAAQHV
LREHLKSMAE GQDPLVRSLE IEKRQMFCHK MARVLQCLPD NFDLNGASIG NLLFIDTLCA
GENRLQCSID FFHQMLDIRG VVRPIVECNL QIAAELQDGS TVIGQHLLTA KETPVLHSAI
TKLFLCESEE NPEAVDCSLL SENRQYIEQA DMICYPPGSF FTSIVANLLP VGVGDAVSRN
PNPKVYIPNL GNDPEQLGMS LEDCVLTLIS YLRKHTEQPL PPAKYISTIL LDVNEKYYAG
GIPFERLREL GIKVVQRDLV TMRSAPFYND ELLLRSLLDI CKNHV
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