Gene Patl_1616 details

Gene Information

• Locus tag: Patl_1616
• ID: 4173870
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 1923361
• End bp: 1924011
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638054626
• Product: DoxX
• Protein accession: YP_661192
• Protein GI: 109897937
• COG category: [S] Function unknown
• COG ID: [COG2259] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAGCA AATTATTTAT TGGAACCTTT ATGAGCGTCT TGAATTTAGT CACAGGTGCA 
CAGCGCACAC TAGAAAAAAC CTCCGTCTTT GAGGGCATAG CACCCTTGCT ACTTCGTTTG 
TATTTAGCGC CAATCATGAT CCAAGCTGGT TGGACAAAAC TGGGTAGTTT TGACAATACC 
GTTGATTGGT TCGCCAGTCC AGATTACGGT CTAGGATTAC CCGCCCCTGC GTTGTTGGCC 
TCATTAGCGA TAGGAGCTGA ACTGCTCGGC GGTATCTTCA TTTTAGTGGG ACTTGCCACC 
CGCTGGGCGT CTATTCCCTT AATGTTTACT ATGCTTGTTG CTGCATTTTC TGTGCATTGG 
CCAAACGGCT GGCCAGCGAT AGCTGATGCC TCTAGTTGGT TATCAGATGG TACGATCATG 
CTGAATGAAA ATGTGATGAG CGCACCTGAT AAGTTAGCCG CAGCTAAAAG CTTGTTGCAA 
GAGCATGGGA ATTACAACTG GCTGACATCA AGTGGTAAGT TTGTGATCTT GAACAACGGC 
ATTGAGTTTG CCATGACATA TTTCTTTATG TTGTTGTCAT TGTTCTTCAC AGGTGGTGGT 
AAATTCACCA GTGTGGATTA CTTTCTACGT AAAAAATTTA TGCCTCAATA G 

 

Protein sequence

MGSKLFIGTF MSVLNLVTGA QRTLEKTSVF EGIAPLLLRL YLAPIMIQAG WTKLGSFDNT 
VDWFASPDYG LGLPAPALLA SLAIGAELLG GIFILVGLAT RWASIPLMFT MLVAAFSVHW 
PNGWPAIADA SSWLSDGTIM LNENVMSAPD KLAAAKSLLQ EHGNYNWLTS SGKFVILNNG 
IEFAMTYFFM LLSLFFTGGG KFTSVDYFLR KKFMPQ