Gene Patl_1607 details

Gene Information

• Locus tag: Patl_1607
• ID: 4173861
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 1912907
• End bp: 1913551
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638054617
• Product: sporulation related
• Protein accession: YP_661183
• Protein GI: 109897928
• COG category: [S] Function unknown
• COG ID: [COG3147] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCTCTG CGCTAAAAAA TCGATTAATT GGTACGGTGA TTATTGTGGC TATCGCTGTT 
ATTTTTTTGC CGGATTTATT GGGCGGTAAA ACCCAAAGCG AAAAAGAACT GTTTGTTGAA 
TTACCAGAAC GTCCAGCGGT GAAAACCGTG CAACGTCCAG GCAGTTTTTC TACTGAGGAT 
GTTGCCAGTC TCACCTCTAG AGACATCGAA ATAGTTGAAG ACAATGCTAT CGACGACAAC 
ACGTCTGGCA ATGCAGCAGT ACAAGAAAGC GATATCAAAG GTCAGGAAGA CGCTGATGTG 
GCTGCTCAAT TAGCCAATAC AGCACCCGTG CAAAATTCAG AGCCACAGAC AAAGCCCGTT 
ACAGTATCGA GCACGCACGC TTACGAAAAG GCTTTACTTG AAGGAGCCGG CTGGGTTGTT 
CAGTTGGGGA CGTTTAGGCA CAAAAAAAAT GTGCAGGAAT TACTTGAGAA GTTAGAAAAA 
GCTGGCTATC GCGCTTTTAC CCGACCGGTT CAAACCAGTA GTGGCAAGTT AACTAAAGTG 
TTTGTGGGGC CTGATTTGCA AAAGACTCGT TTAGAAAAGT CCCTCGGCGA ACTGACCGAG 
TTAACAAAAT TAAAAGGGCG AATTACCCCA TTTACCGTCC AGTAA 

 

Protein sequence

MTSALKNRLI GTVIIVAIAV IFLPDLLGGK TQSEKELFVE LPERPAVKTV QRPGSFSTED 
VASLTSRDIE IVEDNAIDDN TSGNAAVQES DIKGQEDADV AAQLANTAPV QNSEPQTKPV 
TVSSTHAYEK ALLEGAGWVV QLGTFRHKKN VQELLEKLEK AGYRAFTRPV QTSSGKLTKV 
FVGPDLQKTR LEKSLGELTE LTKLKGRITP FTVQ