| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1586 |
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| Symbol | |
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| ID | 4173840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1890308 |
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| End bp | 1892518 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054596 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_661162 |
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| Protein GI | 109897907 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.153146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CATTACTCAG CCCAGTTGCA TTGGCTGTTA TGCTTGCTGC GTGTCAGCCC
GACACCGCAA GCCAAACAAA TCAGAACGCG GCGCAACAAA AAGCCAGCCA GCAAGACACT
TCTCCATTAA ATGGTGACAT CACAAAAAAC AACCCCTTAT TGGCCGAGTC AAATGCCCCA
TTTGGTGTGC CTGAATTTTC AAAAATAAAA ATTGAACATT ACGAGCCAGC ATTTGATTTT
GCAATTGCCC AAAATCAACA AGAAATTGAC GACATTGCTC TTTCCAGTGA AGCCCCGACG
TTTGAAAATA CCATCGAAGC GATGGAAAAA TCAGGTCAAG CTCTTAATCA TGTGGCGACT
GTTTTCTACG CACTAAACGG TACTGATACC AGCACAGAGA TGCAGAGCAT TGCTAAAAAG
ATGTCTCCTC GCTTATCTGC ACTAAATGAC GATATATATC TCAATGCTAA ATTGTTCGCT
CGCGTAAAAT CTGTATATGA ACAAAGAGAT AACCTAGAGT TGCGCGTGGA TCAGAAAACC
TTACTTGATG ATAGCTATCA ATCTTTTGTA CGTGGCGGCG CTAATTTAAG CGAAGCAGAT
AAAGCGACAC TGCGTGATTT AAACGGTCAA CTGTCTAAAT TATCTGTTCA ATTTGGCGAG
AATCTACTCG CTGAAACCAA CGCCTTTGAA TTGGTTATTG ATGCCAAAGA TGACTTGGCT
GGATTACCCG ATGACATTAT TGCCGCAGCG GCAGTAACGG CCACTGAGCG GGGCCACGAT
GGGAAATGGG TATTTACTAC TCACCGCCCT AGTAAAAATC CGTTTTTGAC TTACGCCGAA
AATCGCGATT TGCGCAAAGC CTTATACGAG GGTTACATTC AACGTGGAGA CAACGATAAT
GCTAACGATA ATAAAAAGTT AGCCTCAAAA ATAGCCTCTT TACGTTACCA AAAAGCCCAA
TTACTTGACT ATAAAACTTA TGCGGATTTT GTGCTTGAAA AAGCCATGGC GAAAACCCCG
GAAAACGTTT ATGGCTTATT GGACCAAGTA TGGCCAGCGG CATTAGCACA AGCGAAAAAC
GAAGTAGCAG ATATGCAAGA TATGATCAAA GCAGAAGGCG ACGACTTTAC GCTCGCAGCT
TACGATTGGT GGTATTACGC TGAAAAAATT CGCAAAGCCC GTTACGATCT GGATGCCGCG
CAAACTAAGC CGTATTTCTC TCTTGATGCA ACCCGCGAAG GCGTTTTTTA TACCGCTGGA
AAGCTTTGGG GAGTGACCTT TAAAGAGCGC CAAGATATTC CCAAATATCA CCCAGATGTG
CGTACCTTCG AAGTGTTCGA CAAAGACGGC TTTAGCATTG GCGTTTATAT GACGGATTAC
TACGTACGCG AAAGCAAACG TGGTGGCGCT TGGATGAACT CCTACCGTAA ACAGCAAAAA
ATGTTTGGCG AGAACGTTAA GCCAATTATT TACAATGTGC TTAACTACCC TCGCCCTGTA
GGCGACGCGC CGGTTCTGCT GACGTTTGAT CAAGCATCGA CCTTATTTCA CGAATTTGGT
CACGCTATAC AAGGTTTGTT ATCTGATGGT TACTATCAAT CGCAAACGGG CACTTCATTA
CCACGTGATT ACGTAGAGTA TCCGTCGCAA GTGATGGAAA ACTGGATGAT GGAGCCTGAT
GTTTTGGCGC AGTTCGCCAA GCACTATAAA ACCGGTGAAG TGATCCCTCA GACTCTGATT
GAAAAAATTC AAGCTGCGGG TAAATTCAAT CAAGGTTTTG CTACCACAGA GTACATGGCG
GCAGCATTAC TGGATATGAA ATGGCACACC CTTGAAACGG CCACTGAACA GGATGCAGAT
GCGTTTGAAA AGGCTGCGAT GGATGAGATT GGTTTGATCC CACAAATTAC CCCTAGATAT
CGTACAGGCT ATTTCTCGCA TATATTTTCC GGTGGGTATG CGTCAGGCTA TTATGGTTAC
ATTTGGTCAA ACATTTATGA TGCTGATACA TGGCAAGTGT TTAGCCAAAA TGGCATTTTC
GATCAAGACA CTGCAAGCGC CTATCGTGCA CACGTTCTTG AAACTGGCGG CACGGAAGAC
CCGATGATCA TGTATCGTCG TTTCAGAGGT CAAGATCCAA AAGTATGGCC GTTGCTTGAG
CGTCGTGGTT TGCTGTCTGA TGAACAGTTA AAAACAATGA AAGCGCAGTA A
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| Protein sequence | MKKALLSPVA LAVMLAACQP DTASQTNQNA AQQKASQQDT SPLNGDITKN NPLLAESNAP
FGVPEFSKIK IEHYEPAFDF AIAQNQQEID DIALSSEAPT FENTIEAMEK SGQALNHVAT
VFYALNGTDT STEMQSIAKK MSPRLSALND DIYLNAKLFA RVKSVYEQRD NLELRVDQKT
LLDDSYQSFV RGGANLSEAD KATLRDLNGQ LSKLSVQFGE NLLAETNAFE LVIDAKDDLA
GLPDDIIAAA AVTATERGHD GKWVFTTHRP SKNPFLTYAE NRDLRKALYE GYIQRGDNDN
ANDNKKLASK IASLRYQKAQ LLDYKTYADF VLEKAMAKTP ENVYGLLDQV WPAALAQAKN
EVADMQDMIK AEGDDFTLAA YDWWYYAEKI RKARYDLDAA QTKPYFSLDA TREGVFYTAG
KLWGVTFKER QDIPKYHPDV RTFEVFDKDG FSIGVYMTDY YVRESKRGGA WMNSYRKQQK
MFGENVKPII YNVLNYPRPV GDAPVLLTFD QASTLFHEFG HAIQGLLSDG YYQSQTGTSL
PRDYVEYPSQ VMENWMMEPD VLAQFAKHYK TGEVIPQTLI EKIQAAGKFN QGFATTEYMA
AALLDMKWHT LETATEQDAD AFEKAAMDEI GLIPQITPRY RTGYFSHIFS GGYASGYYGY
IWSNIYDADT WQVFSQNGIF DQDTASAYRA HVLETGGTED PMIMYRRFRG QDPKVWPLLE
RRGLLSDEQL KTMKAQ
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