Gene Patl_1585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1585 
Symbol 
ID4173839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp1889483 
End bp1890241 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content45% 
IMG OID638054595 
Productheat shock protein DnaJ-like 
Protein accessionYP_661161 
Protein GI109897906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACTC AGTCTTTACT TAGTGCTGTC GAAGCATTAT TGCTTGCCCA TCCCGAAGGA 
ATAAGTGAAT ACAACTTGCT GAAATGCTTG CAGACTTCGT CACGTGATTC TGAAGCGGCC 
TTGGCTGCTA AATTTGAGCC GTGGAACCCC GAAAACGCTT ATGAGCGTTC AAATAGCACT 
TCTAGTGAAC ACTTGTCAGT GCAGCCAAGT TCAGATAACG CTGCGCTATT TTCATCGTTA 
ACATTGAGTG AGCCCTTAGC TCTATTTCGC ACTCACTTTG TGCTCTTCAA TGGGTTATAT 
CAGTTACGGC AAACTTGGCG AGAGCAGGGT ATTGGTGATA TCGATATTCA TACTCTCAAT 
ATTCGACCTC TACCGCTCGA TATTCGACCG CTACCGCTCA ATGCGCAGGG CAACAATAAT 
AGTCTTTCGA TAGCCGATCC TTTGGCGGAG TATTACTTGG ATTGGGATAA CCTCACAGAG 
ACCTCCCAAG CTGAGGTGGA AACGTTGCTG GATAGCTTTT GGCTAAATTA TCTGCAACAA 
GAGCATCGCT GCGTGCAAAA AAAGAACGGT AATACACGAC AGCTTGAGAA AAGTTATGCC 
GTGTTAGCGC TTCCTATTAA TGCGCCATTA ACAGCAGTGA AGCGCCAATA TCTGAAGCTT 
ATTCATCAGC ACCATCCTGA TAAAGGCGGT GACGTGCATA GCGCACAGAT GCTACAGGGC 
GCATATGCTT ACATACTTGA AAATCAGGGA ATTAGATAG
 
Protein sequence
MATQSLLSAV EALLLAHPEG ISEYNLLKCL QTSSRDSEAA LAAKFEPWNP ENAYERSNST 
SSEHLSVQPS SDNAALFSSL TLSEPLALFR THFVLFNGLY QLRQTWREQG IGDIDIHTLN 
IRPLPLDIRP LPLNAQGNNN SLSIADPLAE YYLDWDNLTE TSQAEVETLL DSFWLNYLQQ 
EHRCVQKKNG NTRQLEKSYA VLALPINAPL TAVKRQYLKL IHQHHPDKGG DVHSAQMLQG 
AYAYILENQG IR