| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1576 |
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| Symbol | |
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| ID | 4172569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1883052 |
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| End bp | 1884197 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054586 |
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| Product | ABC transporter related |
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| Protein accession | YP_661152 |
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| Protein GI | 109897897 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.224014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAA TTAGCCTACA AAATATTTCT ACGGTGCTAC GTAGCACGAG GAGCAGTTTT
CGTTTCCCGC CAATATCCGC AGAATTTGCA GTGGGGGAGT TTGTCGCTAT TGTGGGTCCC
TCCGGAGCAG GGAAGTCGAC TTTACTTAGG CTGATTGCCG GTTTAGAGCA CCTTACACAA
GGAAGTATCT TTTTTGATGG TGAGTCTGTT GAGCATTTGC CGCCCCAGCA ACGCAATGTC
GGCATGGTCT TTCAAAATTA CGCTTTGTTT CCTCACCTAA ACGTGGCGGA CAACTTAGGT
TATGCCCTGA AAGTCAAAAA AGTCGCCCAG TCACAAGTTA CTCATGAGGT TGCCCTCGTA
GCTAAGCGTT TAGCCATTAG TGACCTACTC GAGAGATACC CTAAACAACT ATCAGGAGGG
CAAAGGCAAC GCGTGGCTAT TGGTAGGGCT ATGCTGTCAA AGCCGCAATT ATTTCTATTC
GATGAACCAT TTTCCAACCT CGATCCTGAG CTACGAACAG AAATGCGTCA GCAGTTGAAA
CGGCTGCATT TGGAGTTAGC CACCACCACT CTTTTTGTCA CTCACGATCA ACATGAAGCT
ATGGCATTAG CTCAACGTAT ATTGCTTTTA AGTCATAACG GTGTGGAACA GTTTGACACC
CCTGAGAATA TCTACCGTTC ACCTAATAAC GTTTACGTGG CTCGCTTTTT TGGTGAGCCT
AAAATCAATT TATTTGTAGT AAAGGCTGAC AAGCAAGGAT TACAACTAAC AGGAAAGATT
GAGCATCGTA TTTTTTGTGA TGTGCCTGAA GTGCTGCACA AGCAAACGTT ATTAATGGGG
GTAAGACCAA GGGCATTTAG GGTTTCGCTT CTACCCATCC CTCAAGGGAT CCAAATGCAC
GTCGCTAAAA TAGAGTACTT AGGCGATGTT CAGTATCTCT ATCTGTCACC TTCGATTAGC
TCGACTGACT CAACCCCTTT GGTAAATAAC ATTGAATCAG AAGCAAATGG CGAGCTAGAA
CAAGGAAGTC ATGTGGTGGT CGTTTTATCG AGTGAAGCCG TGGATGTAGG CCAAGTGATT
TATCTTACTT TTACGCTGGA AGACACACTC TTGTTCGATG AAAACGAAAA ACGTATTTCG
CTTTAA
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| Protein sequence | MSQISLQNIS TVLRSTRSSF RFPPISAEFA VGEFVAIVGP SGAGKSTLLR LIAGLEHLTQ
GSIFFDGESV EHLPPQQRNV GMVFQNYALF PHLNVADNLG YALKVKKVAQ SQVTHEVALV
AKRLAISDLL ERYPKQLSGG QRQRVAIGRA MLSKPQLFLF DEPFSNLDPE LRTEMRQQLK
RLHLELATTT LFVTHDQHEA MALAQRILLL SHNGVEQFDT PENIYRSPNN VYVARFFGEP
KINLFVVKAD KQGLQLTGKI EHRIFCDVPE VLHKQTLLMG VRPRAFRVSL LPIPQGIQMH
VAKIEYLGDV QYLYLSPSIS STDSTPLVNN IESEANGELE QGSHVVVVLS SEAVDVGQVI
YLTFTLEDTL LFDENEKRIS L
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