| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1542 |
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| Symbol | |
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| ID | 4172534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1849925 |
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| End bp | 1851061 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054551 |
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| Product | major facilitator transporter |
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| Protein accession | YP_661118 |
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| Protein GI | 109897863 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTCTT TAACTTTCTT TTTGTATTTT GGTCAACTCG GGGTACTGGT CCCTTATCTG
GGCGTGTTCC TTGACGGTCG AGGATTTAGC TCCCAAGAGA TAGGTGAGTT ATTTGCGCTT
ATTACCCTGA TGCGCATTAT TGGGCCGAAT TTGTTTGCTG CTTTTGCTGA CAAGTCAGGC
AAGTCTCTGC GCATTCTGCA GTTCGGGGCG TTTCTTACTT TTGCTACATT TTGTTCCATC
TTTTGGTTAA ACAGCTTTTG GGGACTCACC GTCGCGTTTG GTTTGATGAT GCTGTTTTTT
ACCGCGATTG CGCCACAAAC TGAAGTGATT ACCCTTGGCA GCGTGCGTGG AGACGCGACT
AAATATAGTC ATGTGCGCTT ATGGGGAAGC ATAGGCTTTA TTGTACTGAC AGTGTTGGCG
GGTAAACTTA TTGATGTGTT CTCGAGTGAG GCGCCTATCT ATCTGAGTGG TGCTGTGCTG
CTAGGATTGT TTTTGATCAC GCTTGGCTTA AAGGAAGCTA GCGCCAGCGA CCGCACACTG
ACTAGCGGTG AATCGATTTG GAAAAAAGTG CGCACAAAAG TGTTTGTTGG CTTTATTGTG
TCCTCGACAT TGATCCAAGT AAGCTTTGGC CCTTATTACG GTTTCTTTGC ATTGTACGCG
AGAGATTTAG CTTACACTGG CCAAGAAACG GGAGCCTTGA TCGCCTTGGG TGTTGCGGCA
GAAGTAATCA TATTTTTACT CGCTGGGAAG CTGATTAGTC GCTTTGGTGT TAAGTGGACA
TTGTTAGTCA GTATGCTTCT TACTGCATTA CGCTGGTATC TGTTGGCTGT TGCTGCGCAG
CATTGGCCTG CATTGGTCGT CAGTCAGATG CTCCACGCAT TTAGTTTTGG GTTGATTCAC
GCCGCTTCAA TTAACTTTAT TCACCATTAT TTTGGCCATC AGTTTCGTAG CCAAGGACAA
GCTTTATACA CCAGCATCGG ATTTGGTGTA GGGGGAGCGG CAGGCAACTT CGGCGCTGGA
TTGATATGGG ATCAGGGGCA GGGGGCGGAA ATCGCTTTTA CAATCGCTAC CGTATTCGCG
TTATTAGGCG CTGCTATGGT CGCCTGTATT CCTAGCCGAT ATATGCCGAA ACAGTGA
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| Protein sequence | MLSLTFFLYF GQLGVLVPYL GVFLDGRGFS SQEIGELFAL ITLMRIIGPN LFAAFADKSG
KSLRILQFGA FLTFATFCSI FWLNSFWGLT VAFGLMMLFF TAIAPQTEVI TLGSVRGDAT
KYSHVRLWGS IGFIVLTVLA GKLIDVFSSE APIYLSGAVL LGLFLITLGL KEASASDRTL
TSGESIWKKV RTKVFVGFIV SSTLIQVSFG PYYGFFALYA RDLAYTGQET GALIALGVAA
EVIIFLLAGK LISRFGVKWT LLVSMLLTAL RWYLLAVAAQ HWPALVVSQM LHAFSFGLIH
AASINFIHHY FGHQFRSQGQ ALYTSIGFGV GGAAGNFGAG LIWDQGQGAE IAFTIATVFA
LLGAAMVACI PSRYMPKQ
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