| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1524 |
|---|
| Symbol | |
|---|
| ID | 4172973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 1831169 |
|---|
| End bp | 1831828 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638054533 |
|---|
| Product | thiopurine S-methyltransferase |
|---|
| Protein accession | YP_661100 |
|---|
| Protein GI | 109897845 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGA GTTATTGGCA TGAGAAGTGG CAAAAAGGGG AGACGGCTTT TCATCAATTT
AAAGGGAGCC CTTTGTTAAA AGCGCACTTT GATGAATTAG GATTACCCCA GTCAAGCCGG
CTATTGGTGC CTCTTTGCGG TAAAACCAGA GATATTGCTT GGCTGGTGGC GAATGGTCAT
CATGTGGTTG CCGCCGAGTT GCATGAGCCC GCTGTTATTC AACTGTTCAA AGATATGGAA
ATAGAGCCCA AGGTCATGCA TTTTGAAGAA ATTGACCTAA TTCATTACCA AGCAATGGTC
GGTGGGTTGA TGATTGACGC GTATGTAGGG GATATTTTTC AACTAAACCC AGCGTTGGTT
GGTCGGGTTG ATGCGATTTA TGATCGTGCA GCCTTAGTGG CATTACCTTT CGATATGCGT
GAAAAGTATA CCTTACACAT GCGCGAATTG ACCGGTGCAG CTCCGCAATT ATTGATTAGC
TTCGATTATG AACAACATTT GTTACCCGGC CCACCTTATT GTGTAAATGG CAATGAAATT
ACTGGCCATT ATGGCCAGCA CTATGATATT TCGCAGCTGG CAAGCGAAGA TGTAGTCGGG
GGCCTAAAAG GTAAACTAAA GGCGAATGAA GAGGTTTGGC TGCTGAAATA CAAAACCTGA
|
|---|
| Protein sequence | MQASYWHEKW QKGETAFHQF KGSPLLKAHF DELGLPQSSR LLVPLCGKTR DIAWLVANGH
HVVAAELHEP AVIQLFKDME IEPKVMHFEE IDLIHYQAMV GGLMIDAYVG DIFQLNPALV
GRVDAIYDRA ALVALPFDMR EKYTLHMREL TGAAPQLLIS FDYEQHLLPG PPYCVNGNEI
TGHYGQHYDI SQLASEDVVG GLKGKLKANE EVWLLKYKT
|
|---|
| |