Gene Patl_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1523 
Symbol 
ID4172972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp1830404 
End bp1830946 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content42% 
IMG OID638054532 
ProductNUDIX hydrolase 
Protein accessionYP_661099 
Protein GI109897844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATG AAATACAGAC ATTAACCAGC AAGGTTGTTT ATGAAAACAA ATGGATGCGC 
TTAAAAGAAG ATAAAATTCG CCGCAGCAGT GGTAACGAAG GGATTTATAG CGTGGTTGAG 
AAACCCGACT TTGTGGTGAT TTTAGCTGTG CAAGACGGGT GTATTCATTT GGTTGAACAA 
TATCGCTATC CGATTAAAAA ACGCTGTTGG GAATTACCCC AAGGCGCGTG GGAGGAAAAC 
CCTGATGCTG ATCACGCATT ATTAGCCGCT GGAGAGTTAA AAGAGGAAAC CGGGTTGGTT 
GCGAATAAAA TGCATTATTT GGGAGAGCAA TACCTAGCAT ACGGGTTTTG CAATCAGATG 
TACCATATTT ACCTTGCCAC TGAACTTACC TTTACCCAAA TCAATTTGGA TCCTGAGGAA 
GAGGGATTAA TTACCAAAAA GGTACCGCTC ACTGAGTTCG AGACAATGAT TTTATCTGGT 
GATATTAAAG ATGCCTCTAC TGTGAATGCC TACGGGCTAG CAAAACTTAA AGGGATGCTT 
TAA
 
Protein sequence
MSDEIQTLTS KVVYENKWMR LKEDKIRRSS GNEGIYSVVE KPDFVVILAV QDGCIHLVEQ 
YRYPIKKRCW ELPQGAWEEN PDADHALLAA GELKEETGLV ANKMHYLGEQ YLAYGFCNQM 
YHIYLATELT FTQINLDPEE EGLITKKVPL TEFETMILSG DIKDASTVNA YGLAKLKGML