| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1522 |
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| Symbol | |
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| ID | 4172971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1829663 |
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| End bp | 1830232 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054531 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_661098 |
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| Protein GI | 109897843 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAGTCA TCCAACTACA TCGGGCAAAA AAACAGCTCA TTGCCAGAGA TGAAAACAGC
CTGTTAGTAA AACAGCTGTA CGATGAATAT GGCAGTGCAT TACGCCGTTT TATTCGCGTG
CGCTCACGAT TAAACGACAG CGACTGTGAA GATGTGATGC AAGAGGTATA TGAGCGCCTG
TTGAAGCTCG ACGATTTACC TCAAAAGCTG TCAGGTAGAA TGGATACAGT TCGTAATTAT
CTATTTCAAA TTGCCACCCA TATATTAATC GACCGTGACC GCCGTGCTAA AGTGCGCTGC
AAAGACGCCC ATGTTAGCGA ACAAGATACG GCTATATTTA CATCCTTATT TTCCCCCGAG
CGAGCACTGC AAAATAGAAA GCAGTTACGG GAAATAGAGA CGGCATTAGC AGAGATTAAA
ACCAGCCACA AACAGGCATT TATGTTAAAC AGAGTAGAAG GCATGAGTTA CCGGGAAATC
AGTGACGCAT TAGGTGTATC AGTCAGCACA GTAGAAAAGT ATATTTCAGC GGCCTTGGTT
GCCATCAGAG CGAAGGTGTC TTCCCTATGA
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| Protein sequence | MKVIQLHRAK KQLIARDENS LLVKQLYDEY GSALRRFIRV RSRLNDSDCE DVMQEVYERL
LKLDDLPQKL SGRMDTVRNY LFQIATHILI DRDRRAKVRC KDAHVSEQDT AIFTSLFSPE
RALQNRKQLR EIETALAEIK TSHKQAFMLN RVEGMSYREI SDALGVSVST VEKYISAALV
AIRAKVSSL
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