| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1518 |
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| Symbol | |
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| ID | 4172967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1822628 |
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| End bp | 1824100 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638054527 |
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| Product | amidohydrolase |
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| Protein accession | YP_661094 |
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| Protein GI | 109897839 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGCTCG CCACGAGTTA TATCTACTCA AGCGCAACCT TGGCCGCAGT TAACCCGTTA
GACCCGAACG GCGATGCTGC GACGTTTGTT GAACAGCAGA TTAACCAACA GCAAGCAATG
AGCAACACAC TCGCTGACAA TATGTGGCAG TGGGCCGAAA CTCGGTTTCA CGAGCAAAAA
AGCAGTCAAG CCATGCAAGA TATCCTCATT GAGCATGGCT TTGAAGTCGA TGTTGGCGTA
GCAGGTATGC CCACTGCATT TGTCGCTCGT TATCGCTCAG ATAGCGCGTC GAAGCATCAA
CGCTCAGCAA GCCAAGGGCC AGTGATTGCT ATTTTAGCAG AAATGGACGC CCTGCCCGGC
TTATCTCAAG GAGCGGTTCC TCACCAAGCC CCCATTGCAG GTAAAGCCGC AGGCCACGCG
TGTGGTCATC ATTTATTCGG CGCAGGCTCG CTGGCCGCTG CAATAGCGGT TAAAAACTGG
CTGGTTCTGA ACAAGATAAG CGGCGAAATT CGTTTGTACG GCACACCAGC GGAAGAAGGT
GGCTCAGGCA AGGTGTATAT GGTGCGAGAG GGTTTGTTCA ATGATGTCGA TAGCGTATTG
CATTGGCACC CTGGTGGCCA AAACACGACT CAGCCCATGA CAACACTGGC CAACAAAACG
GCTAAATTTC GCTTTCATGG CATTGCCTCG CATGCCGCTG CAGCGCCGGA GCGAGGCCGT
TCAGCACTCG ATGCCGTAGA AGCCATGAAT TACATGGTAA ATATGATGCG TGAACATGTG
CCCTCAAACA CGCGCATTCA CTATGTCATC ACCAGCGGCG GCGAAGCCCC CAACATAGTG
CCTGAATTTG CTGAAGTCTA TTACTTCCTG CGCACCCCAT CAGCCGGCGA GCTACCCGAG
TTATGGCAAC GCTTAGAGCA AACCGCACAA GCGGCCGCGC TGGGTACACA AACGAAGGTC
GATTGGGAAA TTATGTCAGG CGTGTGGAGT ACCTTGCCAA ATGCCACGCT AGCGAAAGTG
ACATTTGATG CTATGCAGCG TTTTGGTGGT ATTACATACT CTCCTAAAGA ACAAGCATTT
GCTGAAGAGT TGCGCCCAAC ACTCAGTAAA CGTGCATTGA ACCAAGTCGG CAACGAGCAA
ATCATTCAAC CCTATACAGA TGATATCTAT CACGCTACCG CATCTACCGA TGTGGGGGAT
ATTAGCTGGA ACGTGCCCAC GGCAGGCTTT GTAGCCGCCA CTTGGGTACC AGGTACAGCG
CCTCACACCT GGCAAGCGGT TGCTGCTGGC GGCATGAGTA TTGGTCATAA AGGCATGCAC
CTAGCCAGCA AGACGCTCGC GCTAAGTGCA ATACGCTTAT TTCAACAACC CGCGCTGATA
GAAAAAGCAA AAGCAGAGTG GAAAACACGA GTAGGAAATG TGCGGTACCA ATCTCAGATT
GGCGAGCGCG CACCGGCAAT CACGCCGAAA TAA
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| Protein sequence | MLLATSYIYS SATLAAVNPL DPNGDAATFV EQQINQQQAM SNTLADNMWQ WAETRFHEQK
SSQAMQDILI EHGFEVDVGV AGMPTAFVAR YRSDSASKHQ RSASQGPVIA ILAEMDALPG
LSQGAVPHQA PIAGKAAGHA CGHHLFGAGS LAAAIAVKNW LVLNKISGEI RLYGTPAEEG
GSGKVYMVRE GLFNDVDSVL HWHPGGQNTT QPMTTLANKT AKFRFHGIAS HAAAAPERGR
SALDAVEAMN YMVNMMREHV PSNTRIHYVI TSGGEAPNIV PEFAEVYYFL RTPSAGELPE
LWQRLEQTAQ AAALGTQTKV DWEIMSGVWS TLPNATLAKV TFDAMQRFGG ITYSPKEQAF
AEELRPTLSK RALNQVGNEQ IIQPYTDDIY HATASTDVGD ISWNVPTAGF VAATWVPGTA
PHTWQAVAAG GMSIGHKGMH LASKTLALSA IRLFQQPALI EKAKAEWKTR VGNVRYQSQI
GERAPAITPK
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