| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1509 |
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| Symbol | |
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| ID | 4172958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1813136 |
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| End bp | 1813891 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054518 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_661085 |
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| Protein GI | 109897830 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAA TCAAATCGCT ACCCACTAAA CATACTTTGC CTAAATATCA AGATATTGGG
GAAACGTTGA TCAGCCAAAT TTTAGCCGGT GAATATGCAC TCAACTCGCT ATTGCCAACT
GAAAAACAAC TCTGTGAGCA GTTTTCAATC AGCCGCCATA CGGCTCGTGA AGCCCTGCGT
CATGTAGAAA AGACAGGCCT AGTGGAGCGC AAACAAGGCT CAGGGACCTT GGTAAAACGC
AGCACCATGC CCGAGCAAAT TAATCAGTTT ATTAACTCAG TGAAAGACTT GTTGGCTTTT
GGCCAAAATA CCCGATTTGA AGTGCAAGTC AGTGACATGA TCATCCTTGA CGAACAAATG
GCTGAGCTAC TCGATAGCAC AGCGGGGCAA GAATGCATAC ACATAGGCGG TGTGCGGTTT
GAGCCCCATG ATAAGAAACC CATCTGTTAT TCGAATATCT ACCGCCGACC ACATCAAGAT
GAAGTGGATG AAAAACTCAA AGATACCAAA ACAGCGATCT ACGCTGTGAT TGAAGCTTTA
GATGATAAAA AAATTGGCAA AATCGAACAG CAAATTTCAG CGTGTCTTCT ACCTGAGCCC
CTCGCATCAC AATTGGGAGC CACGGCAGAT TCCGCCGCAA TGAAAATTAC ACGCCGCTAC
TACTCTTTGA GTGACGACGA TTTAATTCTG GTTGCCCAAA GTATTTATCC GGCGAAGCGT
TTTAGCTTCA CGTCGGTTCT TTATCCCAAT AAGTGA
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| Protein sequence | MTKIKSLPTK HTLPKYQDIG ETLISQILAG EYALNSLLPT EKQLCEQFSI SRHTAREALR
HVEKTGLVER KQGSGTLVKR STMPEQINQF INSVKDLLAF GQNTRFEVQV SDMIILDEQM
AELLDSTAGQ ECIHIGGVRF EPHDKKPICY SNIYRRPHQD EVDEKLKDTK TAIYAVIEAL
DDKKIGKIEQ QISACLLPEP LASQLGATAD SAAMKITRRY YSLSDDDLIL VAQSIYPAKR
FSFTSVLYPN K
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