| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1501 |
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| Symbol | |
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| ID | 4172227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1800877 |
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| End bp | 1805007 |
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| Gene Length | 4131 bp |
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| Protein Length | 1376 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638054510 |
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| Product | peptidase-like |
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| Protein accession | YP_661077 |
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| Protein GI | 109897822 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACTA GAAACGTTAC GTACAATAAG CGAGGTCCTG ATGCTCACAT CGAACATGCT
TCAGACTCCC TTTCTAACAG AGCTTCAAAC AGCATTTTAC CTCGCTCTTT ACAGCACTAT
TGGTTGGTAC TGTGCGGCTT ACTTATGCTG TGCATGGGGG CGAGTCAAGT TCAGGCCGCA
GATTTGGTTA ACGGCGGCTC AGTATCTGGT GTTATTTCGG TAGCGGGTGA GGAAGATACC
TGGACGTTCA ACGCCACAGC GGGAGAGCGT ATTAATATTC AGTTGGTAGA TTTAGCCGCT
GGTGATTTAT TTCCTCAAAT GACGCTCTAT GCGCCAGATG GTACACGCGT TACTTCGGCG
AGTAATTATA CAGTGGCCAG TATTTATAAT GCTGAAGCGC CTGAAACAGG TACCTATTCT
CTAGTCGTTC AAGACGGCAC CTCACGGCAG GATAATACAG GCGCTTATGC GCTTCATTTT
GCTAAGTCTA TCGGTGCCAA TGAAAACGGC TCGTTGATTA ACGGTAGCTC AGTCAGCGGT
GATATCACCT TAGGCGATTT AGACACTTGG ACGTTTGACG CCATCGAAGG TGAAAGACTG
AATATTCAAT TAGTGGACGT GGATGAAGCT GGTTTTTTCC CGTTGATGAT CCTTTACGCA
CCAGATGGCA GCCGAGTAGG GTCTGCTAGT AATTACACGG TGGCTAACTT ATATAACGTT
GCGGCCACAC AGACAGGAAC GTACATCTTG CTAGTGCAAG ACGGTACGAG TCGACGTGAA
CAGGTAGGTA GTTATGAAGT GCACTTTGCT AAATCCGTTG GCGCAAATGA AAACGGCACG
CTGAATAATG GCGGTGTAGT GAGCAGTGAC ATTGCGTTGG GTGATTTAGA CACTTGGACA
TTTGAGGCTA CGGCAGGTGA AAGACTGAAC ATTCAAATAG CGGATGTGAA CGAAGGCGAC
TTTTTCCCTT TCATGACGAT TTATGGACCA GATGGAACTC GTGTGGGGTC TGCTAGTAAT
TACACTGTGG CAAATTTATA CAATGTTGCG GCCACACAGA CAGGAACGTA CATCTTGCTA
GTGCAAGACG GCACAAGTCG ACGTGAGCAG GTGGGTAATT ATGAAGTGCA CTTTGCTAAG
TCCATTGGCG CTAACGAAAA CGGCACGTTA AATAATGGCG GCGCGGTGAG CAGTGATATC
ACGTTAGGGG ATTTAGATAC CTGGACGTTC GAGGCTACAA CAGGTGAAAG ACTGAACATT
CAAATAGCGG ATGTAGATGA CGCTGGCTTC TTTCCGTTCA TGACGCTTTA TGCGCCTGAT
GGCACCCGCG TAGGGTCTGC TAGTAATTAT ACGGTGGCAA ATTTATACAA TGTTGCGGCC
ACACAAACAG GAACGTACAT CTTGCTAGTG CAAGACGGTA CGAGTCGACG TGATGAGGTA
GGTAGTTATG AAGTGCACTT TGCTAAATCC GTTGGCGCTA ACGAAAACGG CCCACTGATT
AATGGCGGTG CGGTGAGCAG TGACATTACG TTAGGGGATT TAGATACCTG GACGTTCGAG
GCCACGGCAG GCGAAAACCT GAATATTCAA ATAGCGGATG TGGATAACAC TGGCTTCTTT
CCGTTCATGA CGCTTTATGC ACCAGATGGC ACCCGCGTAG GGTCTGCTAG TAATTACACT
GTGGCTAACT TATACAACGT TTCGGCCACA CAAACAGGAA CGTTTACCTT GCTGGTGCAA
GACGGCACAA GTCGTCGTGA TCAGGTAGGT AATTATGAAG TGCACTTTGC TAAATCCGTT
GGCGCTAACG AAAACGGCCC ACTGATTAAC GGTGGCGTGG TGAGCAGTGA CATTACGCTA
GGGGATTTAG ATACCTGGAC ATTTGAGGCG GTTGCCGGTG AACGTTTGCA TATTCAGCTA
TCTGATATCT TGCGTAATGT GTACTTCCCC TTAATGACGC TTTATGCACC GGACGGTAGT
CGAGTCAGTA ACGCCAGCAA CTATTCTGTC GCTAATTTAC GCAATATTCT TGCAACACAA
ACCGGGACGT ACATCTTATT AGTGCAGGAC GGTACAGGCC GACGTGACCA AACTAGCGAT
TATGAAATTC ACTTTGCTAA GTCTCTCGGT GCTAATGAAC ACGGAAAATT AAGCGGCGCT
GGTTCTTATT TTGAAACGGT CACGCAAGGT GACATTGATA CATTCACCTT TGATGGGGTG
GTGGGTGATG AGGTGACACT AGTTATGCGA GAGCTGGAAG TCACTAATTT ATCCCCCTTT
ATTACCTTGC ATAATCCAGA TGGGAGTTAT TTCACTAACG CGAGCCATTA CTCTGAGGCT
GGGGTTTATA ATTTAAGCCT ACCGATGAAT GGAACCTATA CCATTGTGCT CAGTGATGGT
ACTTCAGGCA GAGACCAGAT TGGCGACTAC GTTCTTGAAT ATAACCTGCC AACGGCAGCG
CCTGATCCGC AGAAACCGAT AGCGTCTGCG TCTTCTGCGC CAACGTTATT TAAAGATCAA
GTGATTCAAC TTAACGGTTC TGGCTCCTTC GACCCCGATG AAGCACCAGA GGCGCTCACG
TATAGTTGGA CATTGGTATC TGCACCAGAT AGCAGCGCTG TAGCACAGGC TGATATCGCT
GAGCCGAATA GCGCGAATGC CAGCGTACAA CCTGATGTAT ATGGCGAATA CCGTTTCGAA
CTCACTGTCA GTGATGGTTT ACTCAGTGAC AGTGCGATTG TTACTGTAAC GGTTATCAAC
CGCGCACCTA GCGCCCATGC CGGTGCAGAT CAAAACGTCG AATTAAATGT GCCTACACAG
CTCGATGGCA GTGCATCAAA CGATGCGGAC GGTGATTTAC TGACTTACGC TTGGACGGTG
GTTTCTGTGC CCTCAGGCAG CGCGGTCACT GCACTGCAAA ATAGCACAAG TGTTAACCCA
AGCTTTACAC CAGACGTCGC AGGGGATTAT GTATTTACCC TTGTGGTTGA TGACGGTGAA
GACAGTAGCA TTGGCGACTC AGTTGTGGTG CGCGTGGCCC AGGCGAATGT AGCGCCCCAG
GCTGATATTC AAGTGAGCGG CGACATGCTA ACCGGTACAC AAGTCGCTCT AGATGGCAGT
GCCAGTGTTG ACAATGACAA CGGCCCTCAA GCCCTAACAT ACGAGTGGCA GGTGATAAGT
GCGCCAGCGG GTAGCACTAT TAATACGGCA AGTCTTGTTA GCCAAGGAAC AGCCACCACT
AGCTTTACAG CTGATGTAGC GGGTACCTAT CGTGTACAAC TCGCTGTTTT CGATGGTGAG
TTAACCGATG TGGTTGAGGC CAGTATTGTG ATAAACGAGG TGGTGGTCAA CCAAGGGCCA
GTGGCCGATG CAGGTGCTGA CCAGCAACAG GAACTTGGCG ACAGCGTTGA GGTTAATGCC
TCAGCAAGCT TTGACCCAGA CCAAAGCCCC GCGCCACTGA CGTTCGAATG GGTGTTTGTG
TCAGTGCCCC AGGGTAGCTT GCTGGTTAGC GCGAGTATTG AAAGCACGCC TGCGGGGTTA
GCGATGTTTG TGCCAGACGT CGCAGGTACT TATACGCTCA TGGTCACCGT TAGCGATAGC
GAGCTAACCG ACTCGGACTC CGTCATGGTG ACTGTCAGTG AAAATCAAAT ACCGGTTGCT
GATGCCGGGA GTGACCAAAC CGTTGATGCA GGCGAGCGCG TAGCGCTCGA TGGCTCACTA
AGTTATGACC CTGACTCAGG CCCTCAAGCG CTCAGCTATT TATGGGAGGT GGCTTCTCGC
CCCGAAAATA GCGTAGCTAC CGTTATCAAT AACAATAATG TGCTGGCGTT TATCGAGCCT
GATTTGGCTG GGTTGTATAC ATTGCGGCTA GTGGTGAGTG ACGGGCAAGC AACGGACGAG
GATGAGGTAC TCATTGATGT GATCAACGTG GTGCAACCAA GAATGTGCGA TGTCGATGGC
AATGATTTTG TGGATAGCCT AGATATTCGT GCTATAGCAC GACTTCGCAA TGCAACCGCA
AGTGAAGGCG ATGTGGCAGA TTGGGATCAA AACGGTGTGA TTAACGTGCT AGACGCCAGA
GGTTGTGCAC TTGAGTGTGA CCTATCACGT TGCGCCTTAA AACCCGAGTA A
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| Protein sequence | MDTRNVTYNK RGPDAHIEHA SDSLSNRASN SILPRSLQHY WLVLCGLLML CMGASQVQAA
DLVNGGSVSG VISVAGEEDT WTFNATAGER INIQLVDLAA GDLFPQMTLY APDGTRVTSA
SNYTVASIYN AEAPETGTYS LVVQDGTSRQ DNTGAYALHF AKSIGANENG SLINGSSVSG
DITLGDLDTW TFDAIEGERL NIQLVDVDEA GFFPLMILYA PDGSRVGSAS NYTVANLYNV
AATQTGTYIL LVQDGTSRRE QVGSYEVHFA KSVGANENGT LNNGGVVSSD IALGDLDTWT
FEATAGERLN IQIADVNEGD FFPFMTIYGP DGTRVGSASN YTVANLYNVA ATQTGTYILL
VQDGTSRREQ VGNYEVHFAK SIGANENGTL NNGGAVSSDI TLGDLDTWTF EATTGERLNI
QIADVDDAGF FPFMTLYAPD GTRVGSASNY TVANLYNVAA TQTGTYILLV QDGTSRRDEV
GSYEVHFAKS VGANENGPLI NGGAVSSDIT LGDLDTWTFE ATAGENLNIQ IADVDNTGFF
PFMTLYAPDG TRVGSASNYT VANLYNVSAT QTGTFTLLVQ DGTSRRDQVG NYEVHFAKSV
GANENGPLIN GGVVSSDITL GDLDTWTFEA VAGERLHIQL SDILRNVYFP LMTLYAPDGS
RVSNASNYSV ANLRNILATQ TGTYILLVQD GTGRRDQTSD YEIHFAKSLG ANEHGKLSGA
GSYFETVTQG DIDTFTFDGV VGDEVTLVMR ELEVTNLSPF ITLHNPDGSY FTNASHYSEA
GVYNLSLPMN GTYTIVLSDG TSGRDQIGDY VLEYNLPTAA PDPQKPIASA SSAPTLFKDQ
VIQLNGSGSF DPDEAPEALT YSWTLVSAPD SSAVAQADIA EPNSANASVQ PDVYGEYRFE
LTVSDGLLSD SAIVTVTVIN RAPSAHAGAD QNVELNVPTQ LDGSASNDAD GDLLTYAWTV
VSVPSGSAVT ALQNSTSVNP SFTPDVAGDY VFTLVVDDGE DSSIGDSVVV RVAQANVAPQ
ADIQVSGDML TGTQVALDGS ASVDNDNGPQ ALTYEWQVIS APAGSTINTA SLVSQGTATT
SFTADVAGTY RVQLAVFDGE LTDVVEASIV INEVVVNQGP VADAGADQQQ ELGDSVEVNA
SASFDPDQSP APLTFEWVFV SVPQGSLLVS ASIESTPAGL AMFVPDVAGT YTLMVTVSDS
ELTDSDSVMV TVSENQIPVA DAGSDQTVDA GERVALDGSL SYDPDSGPQA LSYLWEVASR
PENSVATVIN NNNVLAFIEP DLAGLYTLRL VVSDGQATDE DEVLIDVINV VQPRMCDVDG
NDFVDSLDIR AIARLRNATA SEGDVADWDQ NGVINVLDAR GCALECDLSR CALKPE
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