| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1485 |
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| Symbol | |
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| ID | 4172211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1783550 |
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| End bp | 1784677 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638054495 |
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| Product | aminotransferase, class I and II |
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| Protein accession | YP_661062 |
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| Protein GI | 109897807 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTTG GGGCTAAAGC AGCCGAATTA GAAGCACAAG GCCATCATGT TATTAAGCTT
AATATCGGTG AGCCCGATTT TGGCGCGCCA CCTGATGTGT TACTTGCTAT GCAGAACCTG
GCCACGACTT CCCCTCTACC CTATACGTCA GCGCTGGGGT TACCCGAGCT CCGTGCTGCT
ATCGCAGGCT TTTATAAAAT GGCGCATAAC GTCGATATAA GCCCGGATCG TGTGGTCGTG
ACGGCGGGCG CTTCTGCTGC GTTGTTGCTG TTATCGGCGG CGTTTGTAGA CGCTGGGGAT
AATGTGATCA TGGGCGATCC TTCTTATCCC TGTAACCGGC AATTCATAAA GAGCTTCGGA
GGCAATGTTC AATTAGTGCC GACGACAGCA GATTCACGCT TTCAGTTGAA TATGGACTTG
CTTGAAAATC ACTGGCACAG CGGTACGCGA GGTTTAATGT TAGCCACACC GTCAAACCCA
ACAGGCACAG CCGTTGCACC AGATGAATTG CAGGCAATGT GCGCGTTCGC TAAAAGCCGC
GGTGCGTGGC GTATCATTGA TGAGATTTAC CTTAATTTGC ATCACGGTGA CGCAGGTTTT
CAGCCGATTA CCGCGTTATC ATTCGATGAT GAAGCACTTG TTATCAATAG CTTTTCTAAA
TATTTCGGCA TGACTGGCTG GCGCTTAGGT TGGTGTGTGG TACCTGAGCG CGCTGTACCT
GTTATGGAGC GCATGGCGCA AAACTATTAC ATTTGTCCAT CAACCCTCGC CCAAAAAGCC
GCCCTCGAAT GTTTTACACC GGCTTCTATT GCCGTGTGTG AGTCCCGCAG AGCGATGCTT
AAGTCTCGAA AAGAATTGAT TTTAGCCGGG TTGAAAGAGT GTGGTTTGCA CGTGCCTGTC
CAGCCAGATG GCGCATTTTA CGTCTATATT GATGTTCGCC CTACCGGCCT TTCAGCCATG
GACTTTTGTG AGCGTGCACT GCAAGAAGCC CACGTAGCAC TCACTCCAGG CAATGATTTT
GGCGAATTTC AAGGGGATGA TTACGTACGT TTGTCGTTCG CCTCCGCTGA GAGTGAGTTA
CAAGAGGGAT TGGTAAGGTT GAGTGGTTTT ATGCAAAATT TAACATAG
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| Protein sequence | MAFGAKAAEL EAQGHHVIKL NIGEPDFGAP PDVLLAMQNL ATTSPLPYTS ALGLPELRAA
IAGFYKMAHN VDISPDRVVV TAGASAALLL LSAAFVDAGD NVIMGDPSYP CNRQFIKSFG
GNVQLVPTTA DSRFQLNMDL LENHWHSGTR GLMLATPSNP TGTAVAPDEL QAMCAFAKSR
GAWRIIDEIY LNLHHGDAGF QPITALSFDD EALVINSFSK YFGMTGWRLG WCVVPERAVP
VMERMAQNYY ICPSTLAQKA ALECFTPASI AVCESRRAML KSRKELILAG LKECGLHVPV
QPDGAFYVYI DVRPTGLSAM DFCERALQEA HVALTPGNDF GEFQGDDYVR LSFASAESEL
QEGLVRLSGF MQNLT
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