| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1478 |
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| Symbol | |
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| ID | 4172204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1775157 |
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| End bp | 1776482 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054488 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_661055 |
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| Protein GI | 109897800 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAG ACGCGACGAA CTTTGATCGT AGAAGCATGC TAAAAACCTT AACTGCGGGG
GCTGTTTGCA CCCTTGCTGC ATCAGGAATG GCCAACAGCG CGCCGCAGAT CAGCGTGGCT
GAATTTCCCG CCGTCCCTAA AGGGCTTTCC CCTGAATCCC TCGCTGAGGA TGAATCTTTT
TGGGCCAAGG TTGCACTGTT TTACGACACA GCCCAAGGCA TTGTTAATTT GGAGCATGGT
TATTGGGGCA AGATGTCTCG CCCAGTACAA GAAGCCTACG TAGACAATAC CCGTATGGTT
AACACTGACC TGTCTTACTA TGCACGTAAA CACTATAAAA ACGACGAAAG AGTAAGCACC
CTTAACGTTG CTAAAGCTCT TGGGGCACGG GAAGACGAAG TCGTGCTGAC CCGCAATGCC
ACTGAATCAA TTCATAACCT TATTCGCCAG TACAATCGAT TAGAGCCAGA TGATGCCATT
CTGTATACGG ACATCGATTA TCCCAGCTTT AAAGACACCA TGCGCTGGCT TGCGGCGTCT
GGAAACCTCG AGGCGGTTGA GGTAACACTA CCTCCTCAGG CAAATCAGCA GCAAATACTC
GATAAGTACA TTGAAGCCTT TGATAAACAC CCTAATTTAA AATTAATGTT GCTCACTCAT
GTGAGTAATC AACATGGTTT GATTTTGCCC GTCGCTAAGG TTTCGGCCAT CGCGAAGCTA
CGGGGTATAG ATGTGATATG TGACTGCGCT CAATCATGGG GTTTGCTCGA CTTCAATATC
ACAGAATTGA ACGTAGATTG GGCAGGGTTT AATTTGCATA AATGGATTGG CAGCCCAGTG
GGTGTGGGTG CGCTGTATAT GAAAAAAGGC TCATTGAAAA AAGTATCCCC CTACCCTGGT
GAATCTGACC CAAAAAACAT CAGTGTGAAT TCGCGCGTAC ACACAGCTAC AGTCAACTTC
GCTTCAATTT TAACCCTGCC TGCGGCTATC AATTTTCACA ACATGCTTGG CGGCGCTAAC
AAAGAAGCGC GTCTGCGTTA CTTACATGCC TTGTGGGCAA CCGAAGCCCG TAAGATGCCA
CATATCGAAG TACTGGGCGG CGCTGACGGT GAGTCCTGTA CAGGCATGGG TGCATTTCGC
CTTGCGGGTA AAACAACGCT GGAAGAGGCG AAAAATCTAC AGCAAAGGTT AGAAAACGAA
TTTGGCGTTT TTACAGTCGT TCGCGTCGGG TTATCCAGCG GTTGCTGTAT TCGGGTTACA
CCACAGGTAT TTACCTCAGC GAATGATATT AGCCAACTGC TTATCGCTTT GAAAAACCTC
GGTTGA
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| Protein sequence | MSEDATNFDR RSMLKTLTAG AVCTLAASGM ANSAPQISVA EFPAVPKGLS PESLAEDESF
WAKVALFYDT AQGIVNLEHG YWGKMSRPVQ EAYVDNTRMV NTDLSYYARK HYKNDERVST
LNVAKALGAR EDEVVLTRNA TESIHNLIRQ YNRLEPDDAI LYTDIDYPSF KDTMRWLAAS
GNLEAVEVTL PPQANQQQIL DKYIEAFDKH PNLKLMLLTH VSNQHGLILP VAKVSAIAKL
RGIDVICDCA QSWGLLDFNI TELNVDWAGF NLHKWIGSPV GVGALYMKKG SLKKVSPYPG
ESDPKNISVN SRVHTATVNF ASILTLPAAI NFHNMLGGAN KEARLRYLHA LWATEARKMP
HIEVLGGADG ESCTGMGAFR LAGKTTLEEA KNLQQRLENE FGVFTVVRVG LSSGCCIRVT
PQVFTSANDI SQLLIALKNL G
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