| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1477 |
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| Symbol | |
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| ID | 4172203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1774569 |
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| End bp | 1775093 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638054487 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_661054 |
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| Protein GI | 109897799 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGC TTTTACTTAC GTGCGCTTTA TCCATCAGCC TTGCGATGTC TGCAAACGCC
TTTGCCAGCG ATTCACCTGA AGCACGCATT AAAGCTGCTG GTTTCGAATT ACCTGCCCCG
GTAAAACCCA TCGCTAATTA TGTTACCTGG CGACGTTCAG GGAATACCTT GTACCTGTCA
GGTCACGGTG CCTGCGAAGG TAACAGTATA TTGGGAAAAC TCGGCGATAC GCTTAATGTT
GAGCAAGGTT ATGAGGCCGC TCAGCGCGCG GGTTTGTGTG CGCTGGCCAC CATAAAATTG
GCGGTAGGCG ATTTAACGAA GGTTAAACAG GTGCTACAAA TTAACGGCAT GGTAGCAGCG
GTTCCGGCGT TTACTGACCA CTCGAAGGTC ATCAATGGCT TTTCTGATCT GTTTGTCACG
GCGTTTGGTG ACGACGGCAA AGCCGCGCGG GCAGCGGTAG GTATGAGCGG CTTACCTGGC
AATATGTCAG TAGAAGTCAG TGCGGTTATA GCATTAAAAG AATAA
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| Protein sequence | MNKLLLTCAL SISLAMSANA FASDSPEARI KAAGFELPAP VKPIANYVTW RRSGNTLYLS
GHGACEGNSI LGKLGDTLNV EQGYEAAQRA GLCALATIKL AVGDLTKVKQ VLQINGMVAA
VPAFTDHSKV INGFSDLFVT AFGDDGKAAR AAVGMSGLPG NMSVEVSAVI ALKE
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