| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1471 |
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| Symbol | |
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| ID | 4172197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1764364 |
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| End bp | 1765140 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638054481 |
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| Product | methionine aminopeptidase, type I |
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| Protein accession | YP_661048 |
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| Protein GI | 109897793 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0024] Methionine aminopeptidase |
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| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTCA ACATTAAAAC GGCAAAAGAA ATTGAGTTGA TGCGAGCGTC AGGAAAACTC
TTGGCTGAAG TATTCCATAT GTTAGATGGC TTTGTACAAG AAGGGATCTC TACGCTAGAG
ATCAATAATC ACGTCGATAA TTTCATTCGT AATACATTAA ATGCAAGGCC TGCAAGTGTT
GGTCAATACG GTTATCAATT TGCATTAAAT TCATCCGTAA ATGAAGTCAT TTGTCATGGG
GTTCCGCGCG ATAGCTACAA GCTAAAGTCG CGAGATATTG TTAATTTAGA CATTACTCTC
GAGAAAAATG GTTTTATTGC AGACTCCAGC AAAATGTATG TCATGAGCGA CGCAAGTCCA
CTGGCCAAGC GTCTTGTCAA AACCACTTAC GAAGCCATGT GGGCAGGTAT CAAAAAAGTG
AAGCCGGGTG CAACATTAGG TGATGTCGGT GCTGCGATAC AAACCGTAGC ACAAAGCAAT
GGTTACTCTG TTGTCAAAGA GTTTTGTGGG CATGGCATAG GCCGAGAAAT GCATGAAGAT
CCACAAGTTC TTCACTTCGG AGAGGCAGGA ACAGGACTGA GTTTGCAAGC AGGGATGACA
TTTACCATTG AGCCGATGAT TAATCAGGGG AAGGCAAAAA CAAAGACTAA AAAAGATGGT
TGGACAGTGA TTACTGCCGA TAAAAAGCTG TCTGCTCAAT GGGAGCACAC GATTTTAGTG
ACGCAAACGG GTTATGAAGT TTTAACGCTT CGACAAGAAG AAGCAGATCT GATTTAG
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| Protein sequence | MQVNIKTAKE IELMRASGKL LAEVFHMLDG FVQEGISTLE INNHVDNFIR NTLNARPASV
GQYGYQFALN SSVNEVICHG VPRDSYKLKS RDIVNLDITL EKNGFIADSS KMYVMSDASP
LAKRLVKTTY EAMWAGIKKV KPGATLGDVG AAIQTVAQSN GYSVVKEFCG HGIGREMHED
PQVLHFGEAG TGLSLQAGMT FTIEPMINQG KAKTKTKKDG WTVITADKKL SAQWEHTILV
TQTGYEVLTL RQEEADLI
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