| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1445 |
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| Symbol | |
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| ID | 4173602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1737132 |
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| End bp | 1738439 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638054455 |
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| Product | short chain fatty acid transporter |
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| Protein accession | YP_661022 |
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| Protein GI | 109897767 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAACC ATGTCGCGAA GCCCTTTACA AAACTAGTAG AGCGCTATCT GCCCGATCCC
TATATTTTTG TGCTTATCTT GACGCTAGTC ACAATCGGCG CTGCGGTTGT GTTCGAACAG
CAACCTGTCT TAAGCGTTAT TACCCAATGG GGTGATGGAT TTTGGGGTTT GCTGAGCTTT
TCTATGCAAA TGTTATTGGT ATTAGTCAGC GGTTTTATGT TGGCTAATAC GCCATTAATG
AAGAACCTAT TAGGCCGCCT GGCAACGCTG GGAAATACCC CGGGTAAAGC TATTATTTTA
GTGACCTTGG TATCACTCAC CGCCAGTTGG ATCAATTGGG GGTTTGGTTT AGTCATAGGA
GCATTGTTTG CTAAAGCCCT CGCCCGTCAG ACCCATGTAG ATTATCGCCT ATTAGTGGCC
AGTGCTTATT CTGGGTTTGT GGTGTGGCAT GGCGGATTAG CAGGCTCAAT TCCACTGACC
ATTGCCACGC CTGGCCACTT CAGTGAGGAC CAAATCGGCG TAATCACCAC AGGCAACACC
ATTTTCAGCG GCTTTAACCT TATCCTGCTC GCTATCCTAT TTATCGTCGT CCCTCTGGTT
AATCGCCTGA TGTTGCCCCC TGCTGACGAG AGCATTATTG TCAGTCCAGA TAAACTCCAC
GACGACCCTA TGCCAAGCGC CGAAAATACT CGGCCAGCGG ATAAACTTGA GAACAGTAAG
CTGTTAGCGG TGTTAGTCGG TTTTGTGGGT ATCGTCTACC TAGTGAGTTA CTTTGTTCAA
GGCGGCGGCC TTAATCTGAA TATCGTGAAC AGCCTCTTCT TGTTTTTAGC CATCGTCTTA
CACGGCACCC CTAAACGTTT GCTGCACAGT CTTCAACAGG CCGTGCACGG TGGGAGTGGC
ATTATTATTC AGTTTCCGTT TTACGCGGGA ATTATGGCGG TCATGGTGCA ATCTGGATTA
GCACAAAGTT TATCCCAATG GTTGATCAGC TTTGCTAGCG CTGAATCCCT GCCGGTATGG
AGCTTCATCA GTGCGGGTAT CGTCAATATT TTTGTGCCTT CAGGCGGCGG GCAATGGGCG
GTACAAGCGC CTGTTATTCT GCCTGCTGCC GCAGAATTAG GCGCAGACGT GAGCCGCGTG
GCGATGGCAG TGGCGTGGGG CGATGCGTGG ACAAACTTAA TCCAACCATT TTGGGCTTTG
CCCGTGCTAG CCATTGCTGG GCTAAAGGCC AAAGATATTA TGGGATTTTG CTTAGTTCAA
CTTATCGTCA CCGGTATTAT TATTTCGCTA GTATTGCGCT TTGTGTAA
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| Protein sequence | MLNHVAKPFT KLVERYLPDP YIFVLILTLV TIGAAVVFEQ QPVLSVITQW GDGFWGLLSF
SMQMLLVLVS GFMLANTPLM KNLLGRLATL GNTPGKAIIL VTLVSLTASW INWGFGLVIG
ALFAKALARQ THVDYRLLVA SAYSGFVVWH GGLAGSIPLT IATPGHFSED QIGVITTGNT
IFSGFNLILL AILFIVVPLV NRLMLPPADE SIIVSPDKLH DDPMPSAENT RPADKLENSK
LLAVLVGFVG IVYLVSYFVQ GGGLNLNIVN SLFLFLAIVL HGTPKRLLHS LQQAVHGGSG
IIIQFPFYAG IMAVMVQSGL AQSLSQWLIS FASAESLPVW SFISAGIVNI FVPSGGGQWA
VQAPVILPAA AELGADVSRV AMAVAWGDAW TNLIQPFWAL PVLAIAGLKA KDIMGFCLVQ
LIVTGIIISL VLRFV
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