| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1436 |
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| Symbol | |
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| ID | 4173593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1726714 |
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| End bp | 1727601 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054446 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_661013 |
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| Protein GI | 109897758 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAGT GGGAAGGGAT CAACGAATTT GTTTATGTGG CCGAAGCCGA GAGTTTTACT
CAAGCGTCAA AAAACTTAGC TATCTCTACC GCCCAAGTCA GCCGCCAGAT CAGCGCGCTG
GAAACGCGAT TAAACGTGAA GCTGTTTTAT CGCACCACGC GAAAAGTGTC ACTAACTGAC
GAGGGGCGAC TCTTCTACCA GCATTGTCGC AGCGTACTTG ACGGACTCGA TGCCGCTGAG
CGCGCCATCA CGAATTTACA ATCGAAGCCC CAAGGCAAAA TTCGCCTCAC TGCGCCGGTG
ACCTATGGTG AGCAGCAAAT ACTGCCGTTA GTAAATGATT TTATGCTCCA GTACGCAGAG
GTAGAAGTCA CCGCCTATTT AAGTAATCAA AAAGTCGATT TAGTTGAACA AGGATATGAT
CTGGCCATTC GCCTCGGAAA ATTAAGCGAT TCATCCATGA TGGCAAGAAA ACTCGGGACT
CGCACCAACT CTGTGTGCGC CTCCCCTGCC TATTTGGCAA AATTCGGCTT CCCGCACTCT
TTATCTGAGC TGAGTAAACA CAGCTGCTTG CTAGGCACCC TAGATTATTG GCACTTTCGT
GTCGACGACA AAGAGCGAAA TATCCGCGTG AAAGGCAGGC TAAGGTATAA CAGTGGGTTT
AGTTTAGTGG ACGCTGCGCT CAAAGGCTTG GGCATAGTGC AACTGCCAGA CTACTACGTG
CAAGAACATC TTGAAAGTGG CGCCCTGGTC AGTTTATTAG ATAATTATCG CGAATCCGAA
GAAGGTATTT GGGCGATTTA TCCGCGTAAC AGGCATTTAT CCCCCAAAAT TCGCTCCTTA
GTGGATTATC TAGCTGAGCA TATAGGGTAT ACCAATTCCG TTAAATAA
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| Protein sequence | MMQWEGINEF VYVAEAESFT QASKNLAIST AQVSRQISAL ETRLNVKLFY RTTRKVSLTD
EGRLFYQHCR SVLDGLDAAE RAITNLQSKP QGKIRLTAPV TYGEQQILPL VNDFMLQYAE
VEVTAYLSNQ KVDLVEQGYD LAIRLGKLSD SSMMARKLGT RTNSVCASPA YLAKFGFPHS
LSELSKHSCL LGTLDYWHFR VDDKERNIRV KGRLRYNSGF SLVDAALKGL GIVQLPDYYV
QEHLESGALV SLLDNYRESE EGIWAIYPRN RHLSPKIRSL VDYLAEHIGY TNSVK
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