| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1379 |
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| Symbol | |
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| ID | 4171876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1662631 |
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| End bp | 1664499 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054392 |
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| Product | putative alkaline phosphatase |
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| Protein accession | YP_660959 |
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| Protein GI | 109897704 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAACCAC TCAATAAAGT GTTAAAACTT AGTATGTTAA CTATGGCGGT CGTTTTTGGC
CTTTCAGGCT GTGCCCTTGA CGGTGATGAC GGGCAAGATG GCGCCGCAGG TGTTGACGGC
GCAAATGGCA CTGACGGAGC CGATGGCCAA AGCCTGCCCC GTGACGTAAA CATTGAAGTG
GTGGGCCGCT TTACCGCCGG GGGCATAGAG GTGTTTGGTA AGAGTGCTGC TGAAATCGTT
CAGTTTCACC ACGCTTCGAC TACCGCATTC GCGATTAACT CTGCCGTTAA TCAAATTGAA
GTGATTGATT TATCGGGTTT AACCACCGCT GCTGTGGCTA ACCCGTTTTC TGATGCCAGT
TTACAATCTA GCGCGTTTAC ATTTGCTGAT AGCGTAACGG TAAAAGATGA GGCAAATGCA
GATCAAACCA TCACCTTAGG AGCAGCCAAC TCCATTGCCA TTAATGGTGA CATGCTGGCG
ATTGCGGTCG AGGCCAGTGT GAAAACCAGT CAAGGTGCCG TATTGTTTTA CCGTTTAGAT
GCTACTGGCC AAGGTACCTT TATCAAGGCG GTTGCCGCAG ATGCTCTGCC GGATATGGTG
GCGTTCAACC CTGATGGCAG CAACGTATTA GTCGCTAATG AAGGTGAGCC AGACACAAAT
TACGCAGTTG ACCCACAAGG CAGTGTGTCC ATGATCACCA TCGAAGATGG TGTTCCAGCT
GACACAGCAG AAACGATTAA TTTCACCACA GATATGACGT TTTCAAGTGA CACACTTGAT
GATGAAGATT TTGACACGGA TGCAAAGCGC AAGGCGTTGC TGCAAGCGTC AGGGGTTAAA
TTTGCTGGCC CAGCGGGCAT GACAGTCGCG CAAGAATTAG AGCCTGAGTA CATTACCTAC
GCAGCAAACG GTAAAACTGC CTATGTATCA CTTCAAGAAA GTAACGCTAT TGGCATTCTC
GATTTAGAAG ACATGACGAT TGAAGTGCGT GCCCTTGGCT TTAAAGATTG GAATGATTTT
GAATTAGATT TCACTAATAA AGATGAACTC CCTAATTTTA GCAATGTAGA CGGCCTGTAC
GGCATGTATC AGCCAGATAC AATCACGTCA TACCAATACA ATGGCGCGAC CTTTATTTTA
TCAGCCAATG AAGGGGATTC TCGTGATTAT GACGCCTACT CGGAAGAAGT CAGAGTCGCG
GATATTATTG ATGAAGATGA ACTGAATATG ACACTCTCCC CTAGCTTACA AGCCACATAT
GATCTAAGTG GTGGCGATGA TGGTCTGGGG CGTTTAAAAG TCACCACAGC ATTGGGAGAT
GCAGATCAAA ACGGCGAGTT TGAAGCCTTG TACGCTTACG GCGCGCGCTC GTTTTCTATC
TGGGACCAAA ACATTAATCT TGTGTACGAT TCTGGCGATG ACTTCGGTAA GATTTCAGCC
GCTATTTTAG GCAATGACTT TAATAGCGCC CACACCGAAA ACAAAGGCGA CAACCGCTCT
GATGATAAAG GTGGCGAGCC TGAGGCCATT ACCGTAGGGG AGATAGAAGG TCGAACTTAC
GCATTTATTG CCCAAGAGCG ATCTGGTGAT CTGTTCACTT ACGATGTCAC AAATCCATTT
AATGTTGCTT ATGTGGCCCA TTACAACAAT CGGGATTTCA GCACAGACTT CGAGTTAGAC
GATGATTTAA ACAATCCTTG CGATGAAGCC GAAGGCATGG ACTGCAGCGA AGTTGCCATA
TCGGGTGACC TGGGGCCCGA AAGCATTCAA TTTGTCGCCC CAAGTGACAG CCCAAATGGT
AATGCACTAT TGATTATCGG CAACGAAGTA AGCGGTACAG TGACTATTTA TCAAGTGACT
GAGAAATAA
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| Protein sequence | MQPLNKVLKL SMLTMAVVFG LSGCALDGDD GQDGAAGVDG ANGTDGADGQ SLPRDVNIEV
VGRFTAGGIE VFGKSAAEIV QFHHASTTAF AINSAVNQIE VIDLSGLTTA AVANPFSDAS
LQSSAFTFAD SVTVKDEANA DQTITLGAAN SIAINGDMLA IAVEASVKTS QGAVLFYRLD
ATGQGTFIKA VAADALPDMV AFNPDGSNVL VANEGEPDTN YAVDPQGSVS MITIEDGVPA
DTAETINFTT DMTFSSDTLD DEDFDTDAKR KALLQASGVK FAGPAGMTVA QELEPEYITY
AANGKTAYVS LQESNAIGIL DLEDMTIEVR ALGFKDWNDF ELDFTNKDEL PNFSNVDGLY
GMYQPDTITS YQYNGATFIL SANEGDSRDY DAYSEEVRVA DIIDEDELNM TLSPSLQATY
DLSGGDDGLG RLKVTTALGD ADQNGEFEAL YAYGARSFSI WDQNINLVYD SGDDFGKISA
AILGNDFNSA HTENKGDNRS DDKGGEPEAI TVGEIEGRTY AFIAQERSGD LFTYDVTNPF
NVAYVAHYNN RDFSTDFELD DDLNNPCDEA EGMDCSEVAI SGDLGPESIQ FVAPSDSPNG
NALLIIGNEV SGTVTIYQVT EK
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