| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1377 |
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| Symbol | |
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| ID | 4171874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1660746 |
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| End bp | 1662029 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054390 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_660957 |
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| Protein GI | 109897702 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCTT GGAATCTAAT CTGTTTTTTA GGGGCACTGG CTGTCCTTAT CGCTTTCACC
AATCAATTCG TGCTTAAACT GCAAACGACT ATCGCTATTA CGACGGGCTC TGTGGTGATT
TCTCTGTTAT TGATTTTAGC AGTTAAACTG CTGGGGGATG ACTCTGCCCA GTCGCTTATC
AATGTGGTCA GCAGACTAAA CTTTAACCAG ATTCTGCTTA ATGGCATGTT GGGCTTTTTA
TTATTTGCAG GGGCTATGGA GATTGATTTA CGCGCTTTGC GTCGCCAGCG ATGGGAAATC
ACCATACTCG TGCTGTTTTC TACCCTTGTT TCTACCATCA TAGTCGGGTA TTTAAGCGCC
TTTGTTTTAG CGCAATTTGG TTGGGATGTG CCGTTTATAT ATTGTTTGTT GTTCGGTGCG
CTTATCAGCC CCACAGATCC CATCGCTGTG CTCGCGATCA TTAAACAAAT GCAGGCGCCT
AAAAACATTT CGATTCAAGT CGAAGGAGAA TCCTTGTTCA ATGACGGGGT AGGCTTGGTT
ATTTTTTCTA CTCTGTTTGC TGTTGCATTT AGCGGTGTTG AGCCAACAGT TAGCAGCGTT
GCTGAGCTGT TCTTAACAGA AGCGGTAGGG GGAATTATTT TTGGTTTAGT GCTGGCGGTG
ATTGCCCATT ACTTGATCAT AAAAAGTCCA GATATTAACG TTCGCTTATT AGTCACCTTG
GCCATTCCGT CTGCGGGGTA TGCGCTTGCG ATCGCATTGC ATGTATCAGG TGCGCTGGCG
ATGGTGATGT GCGGAATTTT CATCGGCAAT GTCACCCGCT CAAAAGGTGC GCCTTTAGCA
CGAATTTCTA GTATCCGCTT TATCAAGAAC TTCTGGCATG CCACAGATAC CTTCCTAAAT
GCTTTGTTGT TCTTGCTGAT CGGCATGCTG ATTGTCAGTA TGACCCTATC ATTAGACGAG
ATCTTGATTG GTCTTTGTAT GATCCCCGCC GTGTTATTCG CGCGCTTCAT AAGTGTTGGC
ACTCCTTACT TAGTCTTTAG GCAGTTTAGG CGCTACGACT TAAACTCGGT ACGTATTCTG
ACTTGGGGTG GTTTACGAGG TGGTTTAGCG CTCGCGATGG CGGCGTCTAT TCCTAATGAC
ACTATGTTAG GCAATGGTCA TAATTTGCAT AATTTAATGG TCATCGTGAC CTACATAGTG
GTTATTTTTT CCATCGTGGT ACAAGGCTTA ACCATTGCTC CTTTGATTAA GAAGAGTATT
GCCGCTGCTG AGTCTAACAA TTAG
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| Protein sequence | MDAWNLICFL GALAVLIAFT NQFVLKLQTT IAITTGSVVI SLLLILAVKL LGDDSAQSLI
NVVSRLNFNQ ILLNGMLGFL LFAGAMEIDL RALRRQRWEI TILVLFSTLV STIIVGYLSA
FVLAQFGWDV PFIYCLLFGA LISPTDPIAV LAIIKQMQAP KNISIQVEGE SLFNDGVGLV
IFSTLFAVAF SGVEPTVSSV AELFLTEAVG GIIFGLVLAV IAHYLIIKSP DINVRLLVTL
AIPSAGYALA IALHVSGALA MVMCGIFIGN VTRSKGAPLA RISSIRFIKN FWHATDTFLN
ALLFLLIGML IVSMTLSLDE ILIGLCMIPA VLFARFISVG TPYLVFRQFR RYDLNSVRIL
TWGGLRGGLA LAMAASIPND TMLGNGHNLH NLMVIVTYIV VIFSIVVQGL TIAPLIKKSI
AAAESNN
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