Gene Patl_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1369 
Symbol 
ID4171866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp1650789 
End bp1651415 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content48% 
IMG OID638054382 
ProductTetR family transcriptional regulator 
Protein accessionYP_660949 
Protein GI109897694 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAATA CATCATCTAA AAAAGCTTCC GCCAAAGGCA GCTATCATCA CGGCGACCTT 
CGCTCTAGTT TGCTTGAAGC AGCGAAAGCC ATGCTTAGCG AATCGGGCAT TGAAGGCCTT 
TCTTTGCGCA AATTGGCGGA CCGGGTGGGT GTTTCGCGCA CGGCGCCCTA CCATCACTTT 
AAAGATAAAA ATGAGCTGCT GTGCGCCATC GCTCAAGAAG GTTTTGATCA TTGGCATAGC 
AATGCTGAGC GTATTTTGAC GCAAACCGAC ATCAGTAATC GAGAAAAGTA TCACCAGTTT 
TTTCAAAGCT ACATTGGCTA CGCCGCTGAA AACCCTGAAA TGTACGACCT GATGTTTGGC 
CGCACAATTT GGAAGCAGAA CAGCGCGACT AAAGATCTGC GCGCCATTGC TTACCCTAGC 
TTTCAGCGCC AAGTTGAAAT GACCAAAAAA TGGCAAGAGC AGGGTCTAAT GTCGCCACAA 
GAAGATACCC TTCGTCTTGC CCAGGTCACC TGGGGCACGA TGCACGGCAT CGCACGCTTA 
TTAATAGACG GCATATACGC TGATCGCAGT CATATCGAAG AAATGTGCAC TTGCGCAGTC 
AATTTATTTA TTCGCGAGCC TGATTAA
 
Protein sequence
MQNTSSKKAS AKGSYHHGDL RSSLLEAAKA MLSESGIEGL SLRKLADRVG VSRTAPYHHF 
KDKNELLCAI AQEGFDHWHS NAERILTQTD ISNREKYHQF FQSYIGYAAE NPEMYDLMFG 
RTIWKQNSAT KDLRAIAYPS FQRQVEMTKK WQEQGLMSPQ EDTLRLAQVT WGTMHGIARL 
LIDGIYADRS HIEEMCTCAV NLFIREPD