| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1278 |
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| Symbol | |
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| ID | 4173289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1533918 |
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| End bp | 1534991 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054285 |
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| Product | phosphoserine phosphatase SerB |
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| Protein accession | YP_660858 |
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| Protein GI | 109897603 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.285507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTGAAT TTAGCCCGCA CTCTAAACAA TTGGCGTCTA GCCTCTTCCT TGAACGTTTG
ATTGCAGATC AAACGTTCGA TCAGTTCCAT TTCATCAATG ATCGCATTGT TAGCACAATT
GCTCACGAGC ATTTCACCCC CAGCAAGCTC AGCTTAAAGG GCTTCGATTT AACCAAAGAG
CACAGTAGCT TGGTTATCTT TGCTGAGGGG TTAAGCCTCG CGAAAGTCTT CGCTGTGTCC
ATGGCCTTTG CGGATAAGTT AAATGTGCTG TGTTACCAAG TTTTGCGAGA TGTGCCTCTT
TCTGGCGTCG GTATCGTGCT GCGCGTAGAG CGGCTGAGCA TAGAAGACCT AAGGCCATTA
TTAGAGCGTA TTGCGAATGA GCATGCAGTA GAAATATGTT TATTTTCAAG TGCGCCGCGT
TTGGACGAAC CAGGTTTATT GCTAATGGAC ATGGACAGCA CAGTCATCAG TATTGAATGC
ATCGATGAAA TTGCCAAGCT TGCCGGGGTA GGAGAGGAAG TCTCCAGTGT CACTGAGCAG
GCCATGCAAG GAAAACTCGA TTTTGAGGAA AGCTTACGTA GCCGAGTCGG GTGCCTCAAG
GACGCAAATG AAGACATATT GCAGCAAGTG CGCCGTGCCC TGCCGCTAAT GCCGGGTATT
TTCAACTTAG TTAAATTCTT AAAGCAGCAC CAGTGGAAAT TAGCGATTGC CTCCGGTGGC
TTTAGTTATT TTGCGGACTA TTTGGCTGAC AGATTGGAGC TTGATGCTGC TGTAGCGAAT
GAGCTTGAAA TAGTTGATGG TAGACTGACG GGACGGGTCT CGGGGTCAGT GGTCGATGCT
CAGGTCAAGG CTGCTACATT GCTAGAGCTG GCGAATGAAT TCGATATCAC AGATTGTCAA
ACCATGGCCA TGGGCGACGG GGCAAATGAT TTGGTCATGA TGAATGCTGC AGCGCTTGGC
GTTGCATTTC ACGCAAAGCC GGTTGTACGT GCCCAAGCGG ATATTTCTAT TCGAAACGGC
GGTTTAGATT CTATATTGTG GGTATTGGCG GCGGCCACAC CGTGTAAAAA ATAA
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| Protein sequence | MFEFSPHSKQ LASSLFLERL IADQTFDQFH FINDRIVSTI AHEHFTPSKL SLKGFDLTKE
HSSLVIFAEG LSLAKVFAVS MAFADKLNVL CYQVLRDVPL SGVGIVLRVE RLSIEDLRPL
LERIANEHAV EICLFSSAPR LDEPGLLLMD MDSTVISIEC IDEIAKLAGV GEEVSSVTEQ
AMQGKLDFEE SLRSRVGCLK DANEDILQQV RRALPLMPGI FNLVKFLKQH QWKLAIASGG
FSYFADYLAD RLELDAAVAN ELEIVDGRLT GRVSGSVVDA QVKAATLLEL ANEFDITDCQ
TMAMGDGAND LVMMNAAALG VAFHAKPVVR AQADISIRNG GLDSILWVLA AATPCKK
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