| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1208 |
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| Symbol | |
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| ID | 4172674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1458307 |
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| End bp | 1459089 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638054215 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_660788 |
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| Protein GI | 109897533 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAACGA AAAATTATAT TTATAAAATC ATTTGTGTGG TTTTTTCTTT GGTGTTTTTA
ACGACGTCAG TCAGCGCCTC GCAAAAAACA AACGTGGTTA AAAAAGTTAA ACCCTCTGTG
GTAGGGGTAG GATTGTATGA TGCAATGTCT GCTGTTTCGC ATCAGCTGCG GGGAAGTGGC
TTTGTATTTG GTGATGGAAC GCTCATTGCG ACTAACTTCC ACGTTGTATC AGAACCGCTT
GATCCACAGA TTGTCCAATA TCATATTGTT TTTTCGGGGA CGGGGCGACA ACCTAAAATC
CATAAAGCTG AAATTATCGC TAAGGACCCG GTGCACGATT TAGCAATACT GAAAATTCGT
GACACACTGC CAGCTTTGCA GCTTGGCCCA GATGAGTATG TTGATGATGG TCAAGACATA
CTAATGACAG GATTCCCGAT TGGGTCAATA TTAGGATTAT ACCCGGCAAC CCATAAAGGA
ATGATTGCAG CACTCACCCC AGACGTGATC CCAAGTGCCA ATGCGCGTAA CTTAACCATG
AAAATGCGCA ATCGTTTAGA GAGTCCATTC ATGATCTATC AACTGGATAT GACTGCCTAC
CCTGGCAATA GTGGTAGCGC CATTTATGAT GCCGAGACAG GCCGTGTGGT GGGGATAATT
AACAAGGTAT TTATTAAAGA AACCAAAGAA GCGGTTTTAG AAAAACCGAG CGGCATTAGC
TATGCAATTC CTGTTAAATA TTTAAGATTA TTAAGCAAAA AGAAAGGGAT TGCGGTAAAC
TGA
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| Protein sequence | MITKNYIYKI ICVVFSLVFL TTSVSASQKT NVVKKVKPSV VGVGLYDAMS AVSHQLRGSG
FVFGDGTLIA TNFHVVSEPL DPQIVQYHIV FSGTGRQPKI HKAEIIAKDP VHDLAILKIR
DTLPALQLGP DEYVDDGQDI LMTGFPIGSI LGLYPATHKG MIAALTPDVI PSANARNLTM
KMRNRLESPF MIYQLDMTAY PGNSGSAIYD AETGRVVGII NKVFIKETKE AVLEKPSGIS
YAIPVKYLRL LSKKKGIAVN
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