| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1204 |
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| Symbol | |
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| ID | 4172610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1455424 |
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| End bp | 1456233 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054211 |
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| Product | hypothetical protein |
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| Protein accession | YP_660784 |
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| Protein GI | 109897529 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAC TTCGAAAGTA CGCTGATCTC CCTATTATTG GGCCAGTGGT AAAAAAAGTA
ATGAATTTGG TGGTAAGCCA GAAGGCTAAT CAGATCTCTA GACATTTCGC GGAATACCTC
AGCCCTGTTG TTGCCCTGTC AGACGATCTT CGTAATGAAT CTTATAAAAT TAGGCACAAA
GTCTATTGCG AAGAATTAAA GTTTGAAGAT GAACGTTCAG ACAAGATGGA AACAGATCAA
TTTGATAGTC ACTCTACCCA TTGTTTAATT AAGCACCTCC CTACTGGTGA ATATGCCGGT
ACGGTTCGCA TCGTGCGCTC TATGAGTGAA GAGCAACTCC TACCAATAGA GAAATACTGT
ATTAGTTCGA TTGCTGATGA CGCAGTACAT CCAAGTGATT TTCCACGAAG TGAAATATGT
GAAATATCTC GATTGGCAGT CCCCGCTCAG TTTCGAAAGC GTGCCACGGA TAAATTTAAG
GGTTCAGCCA CAGGTGCTAT CAATGAGCAT ATTTACTCTG AGCGCGAGCT ACGCTGTTTC
CCCTTTATTG CGGTGGGGCT ATATTTGTGC GCCGCGTCTA CCTCGCGTAA ACACGATATT
AAACATTGTT TTGTGATGAT GGAGCCAAGA CTGGCGCGCA GCTTACGCTT TGTGGGCATC
CCCTTTCAAC AAGTTGGCCC CGTTGTAGAA TATCACGGGA AGAGAGCCCC ATACTATATC
AGCCGTCACC TATTAATGAG CGGCCTAACA CCTGGCTTTA AGCGCATGCT GAAGAATATC
GAAAAGAAAG TTAATTCACA ATTCAACTGA
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| Protein sequence | MKQLRKYADL PIIGPVVKKV MNLVVSQKAN QISRHFAEYL SPVVALSDDL RNESYKIRHK
VYCEELKFED ERSDKMETDQ FDSHSTHCLI KHLPTGEYAG TVRIVRSMSE EQLLPIEKYC
ISSIADDAVH PSDFPRSEIC EISRLAVPAQ FRKRATDKFK GSATGAINEH IYSERELRCF
PFIAVGLYLC AASTSRKHDI KHCFVMMEPR LARSLRFVGI PFQQVGPVVE YHGKRAPYYI
SRHLLMSGLT PGFKRMLKNI EKKVNSQFN
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